RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 SUN5Q8TC36 379 aa15.41■□□□□ 0.06
PTPN21-208ENST00000556564 ISYNA1Q9NPH2 558 aa15.41■□□□□ 0.06
PTPN21-208ENST00000556564 AQP7O14520 342 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 TSEN54Q7Z6J9 526 aaKnown RBP15.4■□□□□ 0.06
PTPN21-208ENST00000556564 NOXA1Q86UR1 476 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 ARL11Q969Q4 196 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 OPN3Q9H1Y3 402 aaPredicted RBP15.4■□□□□ 0.06
PTPN21-208ENST00000556564 FOXJ3Q9UPW0 622 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 HBG1P69891 147 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 HBG2P69892 147 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 OIT3Q8WWZ8 545 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 FBXW5Q969U6 566 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 TDRD6O60522 2096 aaKnown RBP15.4■□□□□ 0.06
PTPN21-208ENST00000556564 PRR19A6NJB7 356 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 WISP3O95389 354 aaPredicted RBP15.4■□□□□ 0.06
PTPN21-208ENST00000556564 COMMD7Q86VX2 200 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 TMEM251Q8N6I4 163 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 ZNF646O15015 1829 aaPredicted RBP15.4■□□□□ 0.06
PTPN21-208ENST00000556564 CENPVL1A0A0U1RR11 272 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 YIF1AO95070 293 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 ZNF17P17021 662 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 GMPPAQ96IJ6 420 aaPredicted RBP15.4■□□□□ 0.06
PTPN21-208ENST00000556564 DERL3Q96Q80 235 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 FYTTD1Q96QD9 318 aaKnown RBP15.4■□□□□ 0.06
PTPN21-208ENST00000556564 CDCP2Q5VXM1 449 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 OR10AD1Q8NGE0 317 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 GPR35Q9HC97 309 aa15.4■□□□□ 0.06
PTPN21-208ENST00000556564 DEFB108AA8MXU0 73 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 HRH1P35367 487 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 ZFP36L2P47974 494 aaKnown RBP15.39■□□□□ 0.05
PTPN21-208ENST00000556564 OR6S1Q8NH40 331 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 PINX1Q96BK5 328 aaKnown RBP15.39■□□□□ 0.05
PTPN21-208ENST00000556564 CXXC4Q9H2H0 198 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 C16orf97H3BN30 126 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 GPR37O15354 613 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 ZNF205O95201 554 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 CCR9P51686 369 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 CLDN20P56880 219 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 BAMBIQ13145 260 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 TMEM30CPA0ZSE6 113 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 PELI1Q96FA3 418 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 FCRL1Q96LA6 429 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 HS3ST3B1Q9Y662 390 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 SEMG1P04279 462 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 COX6A1P12074 109 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 SUB1P53999 127 aaKnown RBP eCLIP15.39■□□□□ 0.05
PTPN21-208ENST00000556564 OR51A4Q8NGJ6 313 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 HPSE2Q8WWQ2 592 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 FLVCR1Q9Y5Y0 555 aa15.39■□□□□ 0.05
PTPN21-208ENST00000556564 SIX6O95475 246 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 PI3P19957 117 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 MPGP29372 298 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 ALDH3B2P48448 385 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 ZNF816Q0VGE8 651 aaPredicted RBP15.38■□□□□ 0.05
PTPN21-208ENST00000556564 OR1S2Q8NGQ3 325 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 RBFOX1Q9NWB1 397 aaKnown RBP15.38■□□□□ 0.05
PTPN21-208ENST00000556564 CT45A6P0DMU7 189 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 CT45A5P0DMU8 189 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 CT45A7P0DMV0 189 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 COX7A1P24310 79 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 CT45A1Q5HYN5 189 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 CT45A3Q8NHU0 189 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 CNTNAP3BQ96NU0 1288 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 RANGRFQ9HD47 186 aaPredicted RBP15.38■□□□□ 0.05
PTPN21-208ENST00000556564 RTP5Q14D33 572 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 KISS1Q15726 138 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 NUFIP2Q7Z417 695 aaKnown RBP15.38■□□□□ 0.05
PTPN21-208ENST00000556564 OR8D4Q8NGM9 314 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 DUSP21Q9H596 190 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 PLEKHB1Q9UF11 243 aaPredicted RBP15.38■□□□□ 0.05
PTPN21-208ENST00000556564 A0A1W2PRD5 423 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 A0A1W2PRF3 423 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 A0A1W2PRM7 423 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 DYRK1AQ13627 763 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 PLPPR5Q32ZL2 321 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 ASB5Q8WWX0 329 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 SCARF2Q96GP6 870 aaPredicted RBP15.38■□□□□ 0.05
PTPN21-208ENST00000556564 SCPEP1Q9HB40 452 aa15.38■□□□□ 0.05
PTPN21-208ENST00000556564 APOC3P02656 99 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 INPP5JQ15735 1006 aaPredicted RBP15.37■□□□□ 0.05
PTPN21-208ENST00000556564 SLC39A7Q92504 469 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 PTDSS2Q9BVG9 487 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 CHST6Q9GZX3 395 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 C4orf51C9J302 202 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 BGLAPP02818 100 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 COX6B1P14854 86 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 IL11P20809 199 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 KRTCAP3Q53RY4 240 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 CEACAM1P13688 526 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 SPSB1Q96BD6 273 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 ZSWIM8A7E2V4 1837 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 MRPS34P82930 218 aaKnown RBP15.37■□□□□ 0.05
PTPN21-208ENST00000556564 RHOUQ7L0Q8 258 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 Q8IYB0 196 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 C17orf47Q8NEP4 570 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 TGIF2Q9GZN2 237 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 HRH4Q9H3N8 390 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 C1QCP02747 245 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 INSL4Q14641 139 aa15.37■□□□□ 0.05
PTPN21-208ENST00000556564 FAM58AQ8N1B3 248 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms