RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 ERO1BQ86YB8 467 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 TRAM1L1Q8N609 369 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 DCAKDQ8WVC6 231 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 RERGQ96A58 199 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-218ENST00000556256 RCN3Q96D15 328 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 ZFP3Q96NJ6 502 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 RDH12Q96NR8 316 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 CDX2Q99626 313 aaPredicted RBP1.47□□□□□ -2.17
SCFD1-218ENST00000556256 EMC6Q9BV81 110 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 NUDT9Q9BW91 350 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 SFXN3Q9BWM7 321 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 OR51B5Q9H339 312 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 FBXO8Q9NRD0 319 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 LRRC42Q9Y546 428 aa1.47□□□□□ -2.17
SCFD1-218ENST00000556256 ARPC4-TTLL3A0A0A6YYG9 625 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 M0R1X1 148 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 SLC19A2O60779 497 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 HSBP1O75506 76 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 SNAI1O95863 264 aaPredicted RBP1.46□□□□□ -2.18
SCFD1-218ENST00000556256 GZMAP12544 262 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 NELFEP18615 380 aaKnown RBP1.46□□□□□ -2.18
SCFD1-218ENST00000556256 NTF3P20783 257 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 MSR1P21757 451 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 GABRR2P28476 465 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 PEX19P40855 299 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 INCA1Q0VD86 236 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 NAB1Q13506 487 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 MFSD14CQ5VZR4 134 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 TTC19Q6DKK2 380 aaPredicted RBP1.46□□□□□ -2.18
SCFD1-218ENST00000556256 ASCL4Q6XD76 172 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 NDUFAF7Q7L592 441 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 LINC00523Q86TU6 105 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 LRRC52Q8N7C0 313 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 APCDD1LQ8NCL9 501 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 CDS1Q92903 461 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 S100PBPQ96BU1 408 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 RGCCQ9H4X1 137 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 TDRD3Q9H7E2 651 aaKnown RBP1.46□□□□□ -2.18
SCFD1-218ENST00000556256 RPRD1BQ9NQG5 326 aaKnown RBP1.46□□□□□ -2.18
SCFD1-218ENST00000556256 HEBP1Q9NRV9 189 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 VAX2Q9UIW0 290 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 CES1P1Q9UKY3 287 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 DDX19BQ9UMR2 479 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 FARSAQ9Y285 508 aaKnown RBP1.46□□□□□ -2.18
SCFD1-218ENST00000556256 NEURL4Q96JN8 1562 aa1.46□□□□□ -2.18
SCFD1-218ENST00000556256 HACD1B0YJ81 288 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.45□□□□□ -2.18
SCFD1-218ENST00000556256 ZNF701M0R085 212 aaPredicted RBP1.45□□□□□ -2.18
SCFD1-218ENST00000556256 MANBAO00462 879 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 GATBO75879 557 aaKnown RBP1.45□□□□□ -2.18
SCFD1-218ENST00000556256 LCA5LO95447 670 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 PRKACAP17612 351 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 PMCHP20382 165 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 APLNRP35414 380 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 CSKP41240 450 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 YWHAEP62258 255 aaKnown RBP1.45□□□□□ -2.18
SCFD1-218ENST00000556256 FUT5Q11128 374 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 MAD2L1BPQ15013 274 aaPredicted RBP1.45□□□□□ -2.18
SCFD1-218ENST00000556256 SP6Q3SY56 376 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 DEGS2Q6QHC5 323 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 C16orf47Q6ZP98 133 aaPredicted RBP1.45□□□□□ -2.18
SCFD1-218ENST00000556256 SLC35D2Q76EJ3 337 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 OR2W3Q7Z3T1 314 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 SLC30A8Q8IWU4 369 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 SLC25A29Q8N8R3 303 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 WDR31Q8NA23 367 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 PIH1D2Q8WWB5 315 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 RXFP2Q8WXD0 754 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 BAALCQ8WXS3 180 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 OR8D1Q8WZ84 308 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 WDR34Q96EX3 536 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 BCL7BQ9BQE9 202 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 LINC00574Q9H8X3 128 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 ZMAT5Q9UDW3 170 aaKnown RBP1.45□□□□□ -2.18
SCFD1-218ENST00000556256 SBNO1A3KN83 1393 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 BRWD3Q6RI45 1802 aa1.45□□□□□ -2.18
SCFD1-218ENST00000556256 ANKRD12Q6UB98 2062 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 SCN1AP35498 2009 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 IGHV6-1A0A0B4J1U7 121 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 ZNF98A6NK75 572 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 OR7C2O60412 319 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 CCDC22O60826 627 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 UPK1BO75841 260 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 TTC4O95801 387 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 PTHP01270 115 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 CRYGCP07315 174 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 RNASE2P10153 161 aaKnown RBP1.44□□□□□ -2.18
SCFD1-218ENST00000556256 HSPD1P10809 573 aaKnown RBP1.44□□□□□ -2.18
SCFD1-218ENST00000556256 PRKACBP22694 351 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 CPN2P22792 545 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 IVDP26440 423 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 IL3RAP26951 378 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 TAS2R43P59537 309 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 FAM53BQ14153 422 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 DMC1Q14565 340 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 NKAIN1Q4KMZ8 207 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 LUZP6Q538Z0 58 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 PRSS54Q6PEW0 395 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 C16orf87Q6PH81 154 aa1.44□□□□□ -2.18
SCFD1-218ENST00000556256 SPINT4Q6UDR6 99 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms