RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 OPN1MWP04001 364 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 CSF1P09603 554 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 OPN1MW2P0DN77 364 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 OPN1MW3P0DN78 364 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 GRK5P34947 590 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 GMFBP60983 142 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 GRB2P62993 217 aaKnown RBP11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 GUCA2AQ02747 115 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 TIGD6Q17RP2 521 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 RPL13AP3Q6NVV1 102 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 FAM57BQ71RH2 274 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 TIGD4Q8IY51 512 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 C11orf42Q8N5U0 333 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 OR52L1Q8NGH7 329 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 OR10Z1Q8NGY1 313 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 OR5R1Q8NH85 324 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 PIFOQ8TCI5 191 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 OR5P3Q8WZ94 311 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 RORBQ92753 470 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 CMTM5Q96DZ9 223 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 TSSK6Q9BXA6 273 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ELL3Q9HB65 397 aaPredicted RBP11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ARMC1Q9NVT9 282 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ARGLU1Q9NWB6 273 aaPredicted RBP11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 DNAJC27Q9NZQ0 273 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ZNF391Q9UJN7 358 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 MAB21L2Q9Y586 359 aa11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 KMT2CQ8NEZ4 4911 aaKnown RBP11.69□□□□□ -0.54
CHMP4BP1-201ENST00000556017 IGKV1D-17A0A075B6S4 117 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 H3BUX3 64 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 M0R1W7 72 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 SIGLEC5O15389 551 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 CHST1O43916 411 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 RHBDL1O75783 438 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 SOX14O95416 240 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ANXA2P07355 339 aaKnown RBP11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ACAA1P09110 424 aaPredicted RBP11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 GABRA5P31644 462 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 NAA10P41227 235 aaPredicted RBP11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 KIR2DS4P43632 304 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 CAV3P56539 151 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ACSM1Q08AH1 577 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 PRDX4Q13162 271 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 EIF2B1Q14232 305 aaKnown RBP11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 HERPUD1Q15011 391 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 TAF13Q15543 124 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 LRRC10Q5BKY1 277 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 KRT74Q7RTS7 529 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 CMTM4Q8IZR5 234 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 OR6K6Q8NGW6 343 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 H1FXQ92522 213 aaKnown RBP11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 NSMCE2Q96MF7 247 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 PAPOLGQ9BWT3 736 aaKnown RBP11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 MEGF9Q9H1U4 602 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 TOR3AQ9H497 397 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 SP140LQ9H930 580 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 TBC1D23Q9NUY8 699 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ZNF281Q9Y2X9 895 aa11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 CAB39Q9Y376 341 aaPredicted RBP11.68□□□□□ -0.54
CHMP4BP1-201ENST00000556017 TCRBV5S2A0A599 114 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 FAM183AA6NL82 134 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ZNF850A8MQ14 1090 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 TNFRSF11BO00300 401 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 KRT36O76013 467 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 CST4P01036 141 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ATP6V1B2P21281 511 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 EEF1B2P24534 225 aaKnown RBP11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 SLC15A1P46059 708 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 PGAM4Q8N0Y7 254 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 C11orf44Q8N8P7 122 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 AQP11Q8NBQ7 271 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 CSNK2A3Q8NEV1 391 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 OR52H1Q8NGJ2 320 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 WIPF2Q8TF74 440 aaPredicted RBP11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 MCUR1Q96AQ8 359 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 DUS3LQ96G46 650 aaKnown RBP11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 CDRT15Q96T59 188 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 SSX3Q99909 188 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ELAC2Q9BQ52 826 aaKnown RBP11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 DGCR6LQ9BY27 220 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 METTL8Q9H825 291 aaKnown RBP11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 CMC2Q9NRP2 79 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 SLC25A10Q9UBX3 287 aaPredicted RBP11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 KLHDC2Q9Y2U9 406 aa11.67□□□□□ -0.54
CHMP4BP1-201ENST00000556017 BTBD17A6NE02 478 aa11.66□□□□□ -0.54
CHMP4BP1-201ENST00000556017 OR2AT4A6NND4 320 aa11.66□□□□□ -0.54
CHMP4BP1-201ENST00000556017 PSG2P11465 335 aa11.66□□□□□ -0.54
CHMP4BP1-201ENST00000556017 LY6EQ16553 131 aa11.66□□□□□ -0.54
CHMP4BP1-201ENST00000556017 GFOD2Q3B7J2 385 aa11.66□□□□□ -0.54
CHMP4BP1-201ENST00000556017 SAMD4BQ5PRF9 694 aaKnown RBP11.66□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ERI1Q8IV48 349 aaKnown RBP11.66□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ZNRF1Q8ND25 227 aa11.66□□□□□ -0.54
CHMP4BP1-201ENST00000556017 OR6N2Q8NGY6 317 aa11.66□□□□□ -0.54
CHMP4BP1-201ENST00000556017 INTS14Q96SY0 518 aa11.66□□□□□ -0.54
CHMP4BP1-201ENST00000556017 BRD7Q9NPI1 651 aa11.66□□□□□ -0.54
CHMP4BP1-201ENST00000556017 MPC1Q9Y5U8 109 aa11.66□□□□□ -0.54
CHMP4BP1-201ENST00000556017 TMEM210A6NLX4 147 aa11.65□□□□□ -0.54
CHMP4BP1-201ENST00000556017 ADARB2-AS1A8MUL3 147 aa11.65□□□□□ -0.54
CHMP4BP1-201ENST00000556017 GMNNO75496 209 aa11.65□□□□□ -0.54
CHMP4BP1-201ENST00000556017 CFL1P23528 166 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms