RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 MRPL23Q16540 153 aaKnown RBP0.75□□□□□ -2.29
SNX6-204ENST00000555541 TMEM236Q5W0B7 351 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 TTC23LQ6PF05 361 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 METAP1DQ6UB28 335 aaPredicted RBP0.75□□□□□ -2.29
SNX6-204ENST00000555541 HORMAD1Q86X24 394 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 PDPNQ86YL7 162 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 RNF10Q8N5U6 811 aaKnown RBP0.75□□□□□ -2.29
SNX6-204ENST00000555541 OR56B2PQ8NGI1 322 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 ITLN2Q8WWU7 325 aaPredicted RBP0.75□□□□□ -2.29
SNX6-204ENST00000555541 UQCC2Q9BRT2 126 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 HIGD2AQ9BW72 106 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 SND1-IT1Q9HBX3 110 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 MRM3Q9HC36 420 aaKnown RBP0.75□□□□□ -2.29
SNX6-204ENST00000555541 ATG2BQ96BY7 2078 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 GBF1Q92538 1859 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 SLC9A3R1O14745 358 aaPredicted RBP0.74□□□□□ -2.29
SNX6-204ENST00000555541 PSPHP1O15172 72 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 HBE1P02100 147 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 RGS6P49758 472 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 CCL23P55773 120 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 ZMYND11Q15326 602 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 SSX2Q16385 188 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 LGALSLQ3ZCW2 172 aaPredicted RBP0.74□□□□□ -2.29
SNX6-204ENST00000555541 HHATQ5VTY9 493 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 COMTD1Q86VU5 262 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 TEX9Q8N6V9 391 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 RPEQ96AT9 228 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 YIPF6Q96EC8 236 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 SLC25A44Q96H78 314 aaPredicted RBP0.74□□□□□ -2.29
SNX6-204ENST00000555541 CENPKQ9BS16 269 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 CRACR2AQ9BSW2 395 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 FBXO8Q9NRD0 319 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 AGPAT4Q9NRZ5 378 aa0.74□□□□□ -2.29
SNX6-204ENST00000555541 CR1P17927 2039 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 BICDL2A1A5D9 508 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 IGLL5B9A064 214 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 ANKRD65E5RJM6 399 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 SLC31A1O15431 190 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 CDH16O75309 829 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 PRSS3P35030 304 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 ATP5G2Q06055 141 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 KDM4DQ6B0I6 523 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 LYPD6Q86Y78 171 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 RPRMLQ8N4K4 120 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 OR9G4Q8NGQ1 327 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 SFXN5Q8TD22 340 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 RSPH1Q8WYR4 309 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 ELMO1Q92556 727 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 ALS2CR12Q96Q35 445 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 TBL1XR1Q9BZK7 514 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 CLN6Q9NWW5 311 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 SDK1Q7Z5N4 2213 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 BRCA1P38398 1863 aaKnown RBP0.73□□□□□ -2.29
SNX6-204ENST00000555541 MPDZO75970 2070 aa0.73□□□□□ -2.29
SNX6-204ENST00000555541 S1PR2O95136 353 aa0.72□□□□□ -2.29
SNX6-204ENST00000555541 HADHQ16836 314 aaKnown RBP0.72□□□□□ -2.29
SNX6-204ENST00000555541 ZYG11AQ6WRX3 759 aa0.72□□□□□ -2.29
SNX6-204ENST00000555541 TRMT10CQ7L0Y3 403 aaKnown RBP0.72□□□□□ -2.29
SNX6-204ENST00000555541 TMEM144Q7Z5S9 345 aa0.72□□□□□ -2.29
SNX6-204ENST00000555541 CPNE9Q8IYJ1 553 aa0.72□□□□□ -2.29
SNX6-204ENST00000555541 ZNF567Q8N184 647 aa0.72□□□□□ -2.29
SNX6-204ENST00000555541 OR5AR1Q8NGP9 310 aa0.72□□□□□ -2.29
SNX6-204ENST00000555541 SNF8Q96H20 258 aa0.72□□□□□ -2.29
SNX6-204ENST00000555541 ACTR3CQ9C0K3 210 aaPredicted RBP0.72□□□□□ -2.29
SNX6-204ENST00000555541 RDH14Q9HBH5 336 aa0.72□□□□□ -2.29
SNX6-204ENST00000555541 ACP6Q9NPH0 428 aa0.72□□□□□ -2.29
SNX6-204ENST00000555541 ACOT9Q9Y305 439 aa0.72□□□□□ -2.29
SNX6-204ENST00000555541 COL6A6A6NMZ7 2263 aa0.72□□□□□ -2.29
SNX6-204ENST00000555541 SIGLEC1Q9BZZ2 1709 aa0.72□□□□□ -2.29
SNX6-204ENST00000555541 EIF3HO15372 352 aaKnown RBP eCLIP0.71□□□□□ -2.3
SNX6-204ENST00000555541 GZMHP20718 246 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 ERFP50548 548 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 KLHL40Q2TBA0 621 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 XKR7Q5GH72 579 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 KCTD16Q68DU8 428 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 CASC1Q6TDU7 716 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 ZNF322Q6U7Q0 402 aaPredicted RBP0.71□□□□□ -2.3
SNX6-204ENST00000555541 RNASE11Q8TAA1 199 aaKnown RBP0.71□□□□□ -2.3
SNX6-204ENST00000555541 PRRC1Q96M27 445 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 DERL3Q96Q80 235 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 ZYG11BQ9C0D3 744 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 BEX1Q9HBH7 125 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 DDX19BQ9UMR2 479 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 ZNF443Q9Y2A4 671 aaPredicted RBP0.71□□□□□ -2.3
SNX6-204ENST00000555541 ZNF257Q9Y2Q1 563 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 TRAPPC1Q9Y5R8 145 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 ICOSQ9Y6W8 199 aa0.71□□□□□ -2.3
SNX6-204ENST00000555541 MALRD1Q5VYJ5 2156 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 MROH5Q6ZUA9 1318 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 IGHV6-1A0A0B4J1U7 121 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 A0A0G2JMP0 313 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 TRBV11-1A0A0K0K1C0 115 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 A0A0X1KG70 313 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 SMCO3A2RU48 225 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 G3V3Q6 166 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 GABRG2P18507 467 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 BCKDHBP21953 392 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 CXCR1P25024 350 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 CFHR2P36980 270 aa0.7□□□□□ -2.3
SNX6-204ENST00000555541 MRPL19P49406 292 aaKnown RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms