RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 TSPAN11A1L157 253 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 ANKRD65E5RJM6 399 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 H7C0C1 242 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 M0R3G1 203 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 OVOL1O14753 267 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 SLC16A7O60669 478 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 RAD1O60671 282 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 DNAJB6O75190 326 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 CDH16O75309 829 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 ERLIN1O75477 346 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 TDP2O95551 362 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 TRBV12-3P01733 135 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 IFNW1P05000 195 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 CDK1P06493 297 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 MMP7P09237 267 aaPredicted RBP0.62□□□□□ -2.31
SRP54-207ENST00000555535 INAFM2P0DMQ5 153 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 RAB4AP20338 218 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 HTR1DP28221 377 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 PBLDP30039 288 aaPredicted RBP0.62□□□□□ -2.31
SRP54-207ENST00000555535 PFN2P35080 140 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 PPICP45877 212 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 ATP5OP48047 213 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 TGM4P49221 684 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 AP1S2P56377 157 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 TPBGQ13641 420 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 RCN1Q15293 331 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 SP6Q3SY56 376 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 PDZD11Q5EBL8 140 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 ARMC12Q5T9G4 340 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 HHATQ5VTY9 493 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 CARD17Q5XLA6 110 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 LRRC66Q68CR7 880 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 KDM4DQ6B0I6 523 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 OR2T5Q6IEZ7 315 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 H3F3CQ6NXT2 135 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 WDR59Q6PJI9 974 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 SPESP1Q6UW49 350 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 EIF3MQ7L2H7 374 aaKnown RBP0.62□□□□□ -2.31
SRP54-207ENST00000555535 CENPQQ7L2Z9 268 aaPredicted RBP0.62□□□□□ -2.31
SRP54-207ENST00000555535 LUZP2Q86TE4 346 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 OR56A4Q8NGH8 313 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 OR2T29Q8NH02 315 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 ASZ1Q8WWH4 475 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 ING5Q8WYH8 240 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 ISG20Q96AZ6 181 aaKnown RBP0.62□□□□□ -2.31
SRP54-207ENST00000555535 APH1AQ96BI3 265 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 S100PBPQ96BU1 408 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 RASD2Q96D21 266 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 XPO6Q96QU8 1125 aaKnown RBP0.62□□□□□ -2.31
SRP54-207ENST00000555535 PKMYT1Q99640 499 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 PDCD1LG2Q9BQ51 273 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 NAA50Q9GZZ1 169 aaKnown RBP0.62□□□□□ -2.31
SRP54-207ENST00000555535 TMEM185BQ9H7F4 350 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 TRIM45Q9H8W5 580 aaPredicted RBP0.62□□□□□ -2.31
SRP54-207ENST00000555535 MTCH1Q9NZJ7 389 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 DDX19BQ9UMR2 479 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 NDRG2Q9UN36 371 aaKnown RBP0.62□□□□□ -2.31
SRP54-207ENST00000555535 SLC22A7Q9Y694 548 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 ENPP4Q9Y6X5 453 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 PLXNA3P51805 1871 aa0.62□□□□□ -2.31
SRP54-207ENST00000555535 ARHGAP32A7KAX9 2087 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 ZNF608Q9ULD9 1512 aaPredicted RBP0.61□□□□□ -2.31
SRP54-207ENST00000555535 IGLV10-54A0A075B6I4 117 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 IGHV3OR16-9A0A0B4J2B5 98 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 A0A0B4J2C4 111 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 CCL15-CCL14A0A0B4J2E2 113 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 A0A0G2JMP0 313 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 TRBV11-1A0A0K0K1C0 115 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 A0A0X1KG70 313 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 TAAR5O14804 337 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 BCKDKO14874 412 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 FCN3O75636 299 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 DHRS3O75911 302 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 TRGV3P03979 118 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 ERCC1P07992 297 aaPredicted RBP0.61□□□□□ -2.31
SRP54-207ENST00000555535 CTSGP08311 255 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 CBR1P16152 277 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 NELFEP18615 380 aaKnown RBP0.61□□□□□ -2.31
SRP54-207ENST00000555535 IL3RAP26951 378 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 MPIP34949 423 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 MRPL19P49406 292 aaKnown RBP0.61□□□□□ -2.31
SRP54-207ENST00000555535 RGS6P49758 472 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 FABP6P51161 128 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 ADIGQ0VDE8 80 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 TFDP2Q14188 446 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 CCL15Q16663 113 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 KRTAP25-1Q3LHN0 102 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 LGALSLQ3ZCW2 172 aaPredicted RBP0.61□□□□□ -2.31
SRP54-207ENST00000555535 ZNF678Q5SXM1 525 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 AMMECR1LQ6DCA0 310 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 TTC19Q6DKK2 380 aaPredicted RBP0.61□□□□□ -2.31
SRP54-207ENST00000555535 APOBEC3HQ6NTF7 200 aaKnown RBP0.61□□□□□ -2.31
SRP54-207ENST00000555535 USP50Q70EL3 339 aaPredicted RBP0.61□□□□□ -2.31
SRP54-207ENST00000555535 UNC93AQ86WB7 457 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 LRRC8AQ8IWT6 810 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 SLC30A8Q8IWU4 369 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 MSRB3Q8IXL7 192 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 SLC25A29Q8N8R3 303 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 CCDC148Q8NFR7 591 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 OR10W1Q8NGF6 305 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms