RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 SRSF10O75494 262 aaKnown RBP9.7□□□□□ -0.86
SHMT2-216ENST00000554975 NDUFB6O95139 128 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 ACTL6AO96019 429 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 APOC1P02654 83 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 MT-ND4P03905 459 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 SULT1A3P0DMM9 295 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 SULT1A4P0DMN0 295 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 CD37P11049 281 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 LOXP28300 417 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-216ENST00000554975 SRD5A2P31213 254 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 PRSS3P35030 304 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 GUCA1AP43080 201 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-216ENST00000554975 SRP9P49458 86 aaKnown RBP9.7□□□□□ -0.86
SHMT2-216ENST00000554975 BIDP55957 195 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 TAS2R19P59542 299 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 GRB2P62993 217 aaKnown RBP9.7□□□□□ -0.86
SHMT2-216ENST00000554975 CSNK2A1P68400 391 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-216ENST00000554975 SF3B4Q15427 424 aaKnown RBP eCLIP9.7□□□□□ -0.866e-8■■■■■ 30.6
SHMT2-216ENST00000554975 FCN2Q15485 313 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 C1orf100Q5SVJ3 147 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 FAM166AQ6J272 317 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 ESPNLQ6ZVH7 1005 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 IZUMO1Q8IYV9 350 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 DNAAF1Q8NEP3 725 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 CCDC107Q8WV48 283 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 IGFBPL1Q8WX77 278 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 SLAMF6Q96DU3 332 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 PIK3IP1Q96FE7 263 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 ARL5BQ96KC2 179 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 UQCC2Q9BRT2 126 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 NAA11Q9BSU3 229 aaPredicted RBP9.7□□□□□ -0.86
SHMT2-216ENST00000554975 ZNF222Q9UK12 451 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 NPTNQ9Y639 398 aa9.7□□□□□ -0.86
SHMT2-216ENST00000554975 TMEM269A0A1B0GVZ9 245 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 A0A1W2PPL8 197 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 A6NIN4 97 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 ZNF726A6NNF4 738 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 IL18BPO95998 194 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 LPLP06858 475 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 GIPP09681 153 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-216ENST00000554975 PGA4P0DJD7 388 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 PGA3P0DJD8 388 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 TMIGD3P0DMS9 266 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-216ENST00000554975 ZNF20P17024 532 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 ZNF43P17038 809 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 OPRM1P35372 400 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 STARP49675 285 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 GSK3AP49840 483 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 DSCR4P56555 118 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-216ENST00000554975 CLDN12P56749 244 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 MFGE8Q08431 387 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-216ENST00000554975 KCNMB1Q16558 191 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 RAET1LQ5VY80 246 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.69□□□□□ -0.86
SHMT2-216ENST00000554975 ALPK2Q86TB3 2170 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 ELMOD2Q8IZ81 293 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 SLC22A24Q8N4F4 322 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 SPICQ8N5J4 248 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 MEIOBQ8N635 442 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 OR10AC1Q8NH08 325 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 C11orf40Q8WZ69 217 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 NTNG2Q96CW9 530 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 WDYHV1Q96HA8 205 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 WFIKKN1Q96NZ8 548 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 OR5B2Q96R09 309 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 BEX2Q9BXY8 128 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 MRPL13Q9BYD1 178 aaKnown RBP9.69□□□□□ -0.86
SHMT2-216ENST00000554975 TAS2R4Q9NYW5 299 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 EMC9Q9Y3B6 208 aa9.69□□□□□ -0.86
SHMT2-216ENST00000554975 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 HAX1O00165 279 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 SULT2B1O00204 365 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 SYT7O43581 403 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 BPNT1O95861 308 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 IFNA2P01563 188 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 MELTFP08582 738 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 TBPP20226 339 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 BDKRB2P30411 391 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 RPS27P42677 84 aaKnown RBP9.68□□□□□ -0.86
SHMT2-216ENST00000554975 CCR6P51684 374 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 RAP2BP61225 183 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 LSM6P62312 80 aaKnown RBP9.68□□□□□ -0.86
SHMT2-216ENST00000554975 SRSF2Q01130 221 aaKnown RBP9.68□□□□□ -0.86
SHMT2-216ENST00000554975 FMODQ06828 376 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 MEF2DQ14814 521 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 TAF13Q15543 124 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 PCGF3Q3KNV8 242 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 GLDNQ6ZMI3 551 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-216ENST00000554975 PGAP1Q75T13 922 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 OR2W3Q7Z3T1 314 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 SERPINA12Q8IW75 414 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 OR51D1Q8NGF3 324 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 OR6N1Q8NGY5 312 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 POC1BQ8TC44 478 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 ZNF431Q8TF32 576 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-216ENST00000554975 FAM46BQ96A09 425 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 INTS12Q96CB8 462 aaKnown RBP9.68□□□□□ -0.86
SHMT2-216ENST00000554975 METTL17Q9H7H0 456 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-216ENST00000554975 G6PC2Q9NQR9 355 aa9.68□□□□□ -0.86
SHMT2-216ENST00000554975 MED29Q9NX70 200 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms