RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 Q6ZSR3 168 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 KRT74Q7RTS7 529 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 SEMA6DQ8NFY4 1073 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 OR2G2Q8NGZ5 317 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 OR10AC1Q8NH08 325 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 TFAP2CQ92754 450 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 POM121Q96HA1 1249 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 TMEM246Q9BRR3 403 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 MOB1AQ9H8S9 216 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 GPR173Q9NS66 373 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 ERVK13-1Q9NX77 482 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 FRRS1LQ9P0K9 344 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 RPL36Q9Y3U8 105 aaKnown RBP10.35□□□□□ -0.75
SYNE2-214ENST00000554928 V9GYS6 101 aa10.35□□□□□ -0.75
SYNE2-214ENST00000554928 NIPBLQ6KC79 2804 aaeCLIP10.35□□□□□ -0.75
SYNE2-214ENST00000554928 NAV3Q8IVL0 2385 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 IGHV3OR15-7A0A075B7D8 119 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-214ENST00000554928 ZNF816-ZNF321PA0A0X1KG74 233 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 LOC107986453A0A1B0GWG9 222 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 SNTNA6NMZ2 147 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 F5H0A9 414 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-214ENST00000554928 H0YAE9 185 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-214ENST00000554928 CDIPTO14735 213 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 PLPP2O43688 288 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 CRLF1O75462 422 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 FCN3O75636 299 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 DHRS3O75911 302 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 TFF1P04155 84 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 GNALP38405 381 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 ETV1P50549 477 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 RIPPLY1Q0D2K3 151 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 RAB40BQ12829 278 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 GALEQ14376 348 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 XAF1Q6GPH4 301 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 MOB3CQ70IA8 216 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 FAM220AQ7Z4H9 259 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 PEG10Q86TG7 708 aaKnown RBP10.34□□□□□ -0.75
SYNE2-214ENST00000554928 KLBQ86Z14 1044 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 ZDHHC23Q8IYP9 409 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 GCSAMQ8N6F7 178 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 SPERTQ8NA61 448 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 FBLIM1Q8WUP2 373 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 GGHQ92820 318 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 RNF170Q96K19 258 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 FN3KRPQ9HA64 309 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 PATZ1Q9HBE1 687 aaKnown RBP10.34□□□□□ -0.75
SYNE2-214ENST00000554928 FGF20Q9NP95 211 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-214ENST00000554928 RNF7Q9UBF6 113 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 CLEC2DQ9UHP7 191 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 ZNF391Q9UJN7 358 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 NOP16Q9Y3C1 178 aaKnown RBP10.34□□□□□ -0.75
SYNE2-214ENST00000554928 MPC1Q9Y5U8 109 aa10.34□□□□□ -0.75
SYNE2-214ENST00000554928 C2CD3Q4AC94 2353 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.33□□□□□ -0.76
SYNE2-214ENST00000554928 PPIAL4EA0A075B759 164 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 A0A1B0GW55 424 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 hCG_1807616A0A1W2PRN6 198 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 OR4C45A6NMZ5 311 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 KIAA1324LA8MWY0 1029 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-214ENST00000554928 B4DSR2 109 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 PPIAL4DF5H284 164 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 FADS2O95864 444 aaKnown RBP10.33□□□□□ -0.76
SYNE2-214ENST00000554928 AVPP01185 164 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 LHBP01229 141 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 MSMBP08118 114 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 DUX4L2P0CJ85 424 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 DUX4L3P0CJ86 424 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 DUX4L4P0CJ87 422 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 DUX4L5P0CJ88 424 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 DUX4L6P0CJ89 424 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 DUX4L7P0CJ90 424 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 PPIAL4FP0DN26 164 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 MDH2P40926 338 aaKnown RBP10.33□□□□□ -0.76
SYNE2-214ENST00000554928 GPM6AP51674 278 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 GTF2A1P52655 376 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-214ENST00000554928 GMFBP60983 142 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 LCN2P80188 198 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 CR1LQ2VPA4 569 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 ZNF404Q494X3 552 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 TMEM155Q4W5P6 130 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 OR2G6Q5TZ20 316 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 PLCXD3Q63HM9 321 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 TMEM42Q69YG0 159 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 DUX4L9Q6RFH8 374 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-214ENST00000554928 WDR82Q6UXN9 313 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 DOK3Q7L591 496 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 THAP5Q7Z6K1 395 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 PRIMA1Q86XR5 153 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 SETD9Q8NE22 299 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 OR51A4Q8NGJ6 313 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 OR11L1Q8NGX0 322 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 LRRC29Q8WV35 223 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 SGCDQ92629 289 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 ERGIC1Q969X5 290 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 MICU1Q9BPX6 476 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 RTL8AQ9BWD3 113 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 TLNRD1Q9H1K6 362 aa10.33□□□□□ -0.76
SYNE2-214ENST00000554928 C14orf119Q9NWQ9 140 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms