RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 C4orf17Q53FE4 359 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 ZNF550Q7Z398 422 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 METTL21AQ8WXB1 218 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 KXD1Q9BQD3 176 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 SMIM3Q9BZL3 60 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 OR11A1Q9GZK7 315 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 PLEKHA2Q9HB19 425 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 NUP210LQ5VU65 1888 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 SLC35E2P0CK97 266 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 OR5H8P0DN80 308 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 TBPP20226 339 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 FHITP49789 147 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 GLYATL3Q5SZD4 288 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 LMF2Q9BU23 707 aaKnown RBP13.9□□□□□ -0.18
SYNE3-203ENST00000554873 NUDT9Q9BW91 350 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 OR52A1Q9UKL2 312 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 CACNA1CQ13936 2221 aa13.9□□□□□ -0.18
SYNE3-203ENST00000554873 MPDZO75970 2070 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 PRH1P02810 166 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 PGA4P0DJD7 388 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 PGA5P0DJD9 388 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 ZNF708P17019 499 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 OR3A1P47881 315 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 SPEM2Q0P670 501 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 ARSJQ5FYB0 599 aaPredicted RBP13.89□□□□□ -0.19
SYNE3-203ENST00000554873 MRPL52Q86TS9 123 aaKnown RBP13.89□□□□□ -0.19
SYNE3-203ENST00000554873 TMEM230Q96A57 120 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 C2orf16Q68DN1 1984 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 KIAA0100Q14667 2235 aaKnown RBP13.89□□□□□ -0.19
SYNE3-203ENST00000554873 LDLRAD4O15165 306 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 DMWDQ09019 674 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 ZNF141Q15928 474 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 ZNF260Q3ZCT1 412 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 SLC22A6Q4U2R8 563 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 ZNF573Q86YE8 665 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 C1orf87Q8N0U7 546 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 SLC35G3Q8N808 338 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 THOC3Q96J01 351 aaKnown RBP13.89□□□□□ -0.19
SYNE3-203ENST00000554873 DCBLD2Q96PD2 775 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 PRR13Q9NZ81 148 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 LRIT1Q9P2V4 623 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 TCFL5Q9UL49 500 aa13.89□□□□□ -0.19
SYNE3-203ENST00000554873 A6NCN8 305 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 A6NNC1 897 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 CDRT15L2A8MXV6 281 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 HSD17B6O14756 317 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 HCRTR1O43613 425 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 TK1P04183 234 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 PNLIPP16233 465 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 ANKRD55Q3KP44 614 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 RELTQ969Z4 430 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 SPACA7Q96KW9 195 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 C4orf45Q96LM5 186 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 RARRES2Q99969 163 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 MYOTQ9UBF9 498 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 TMEM210A6NLX4 147 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 FOXS1O43638 330 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 IFI6P09912 130 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 RPS4XP62701 263 aaKnown RBP13.88□□□□□ -0.19
SYNE3-203ENST00000554873 H3F3AP84243 136 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 HERPUD1Q15011 391 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 NNATQ16517 81 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 POMZP3Q6PJE2 187 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 CSNK1A1LQ8N752 337 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 OR4C3Q8NH37 302 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 BAHD1Q8TBE0 780 aaPredicted RBP13.88□□□□□ -0.19
SYNE3-203ENST00000554873 NEK7Q8TDX7 302 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 GAL3ST4Q96RP7 486 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 CMKLR1Q99788 373 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 C5orf66Q9H5L9 145 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 OBP2AQ9NY56 170 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 GPR132Q9UNW8 380 aa13.88□□□□□ -0.19
SYNE3-203ENST00000554873 MRPS18BQ9Y676 258 aaKnown RBP13.88□□□□□ -0.19
SYNE3-203ENST00000554873 CSTAP01040 98 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 ABLIM2Q6H8Q1 611 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 ASPHD2Q6ICH7 369 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 ZNF774Q6NX45 483 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 CDC20BQ86Y33 519 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 PATE1Q8WXA2 126 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 PTX4Q96A99 478 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 TVP23CQ96ET8 276 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 VSTM2LQ96N03 204 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 SYT3Q9BQG1 590 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 FOXD3Q9UJU5 478 aaPredicted RBP13.87□□□□□ -0.19
SYNE3-203ENST00000554873 F5P12259 2224 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 BORCS7-ASMTA0A0B4J1R7 106 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 MASP2O00187 686 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 GEMIN2O14893 280 aaKnown RBP13.87□□□□□ -0.19
SYNE3-203ENST00000554873 CTSBP07858 339 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 PPP1CCP36873 323 aaKnown RBP13.87□□□□□ -0.19
SYNE3-203ENST00000554873 PAX5Q02548 391 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 TMEM225Q6GV28 225 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 OR51A2Q8NGJ7 313 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 FAM131CQ96AQ9 280 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 GINS3Q9BRX5 216 aa13.87□□□□□ -0.19
SYNE3-203ENST00000554873 SRA1Q9HD15 236 aaKnown RBP13.87□□□□□ -0.19
SYNE3-203ENST00000554873 IGKV1D-42A0A075B6H8 117 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 H0YL77 283 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 CDC14BO60729 498 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 GUSBP08236 651 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms