RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 LYRM1O43325 122 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 PDE6DO43924 150 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SLC19A2O60779 497 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 STK16O75716 305 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 ZNF432O94892 652 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 YIF1AO95070 293 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 GPR75O95800 540 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 TRUB2O95900 331 aaKnown RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 AMBPP02760 352 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 VTNP04004 478 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 FABP3P05413 133 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 UMODP07911 640 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SFTPBP07988 381 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 ADRA2AP08913 450 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 UBBP0CG47 229 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 OR13C7P0DN81 318 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SELEP16581 610 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 NFYAP23511 347 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 F2RP25116 425 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 EPHA2P29317 976 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 ACVR1BP36896 505 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 PIGAP37287 484 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 MARCKSL1P49006 195 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 TAF6P49848 677 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 HTR6P50406 440 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 NUDT2P50583 147 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 PNLIPRP1P54315 467 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 LSM3P62310 102 aaKnown RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 UBA52P62987 128 aaKnown RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 RHOGP84095 191 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 BAXQ07812 192 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 TPBGQ13641 420 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 GPR18Q14330 331 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 IQCJQ1A5X6 159 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 TMEM176BQ3YBM2 270 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 XKR7Q5GH72 579 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SDHAF4Q5VUM1 108 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 TMEM198Q66K66 360 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 TMEM225Q6GV28 225 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SLC8B1Q6J4K2 584 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 CAPN13Q6MZZ7 669 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 INO80CQ6PI98 192 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 ENPP6Q6UWR7 440 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 FAM131AQ6UXB0 335 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 ALKAL1Q6UXT8 129 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 GSG1LQ6UXU4 331 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 GDPGP1Q6ZNW5 385 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 RBPMS2Q6ZRY4 209 aaKnown RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 HIST2H3AQ71DI3 136 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SLC16A9Q7RTY1 509 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 DPY19L4Q7Z388 723 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 OR2W3Q7Z3T1 314 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 GOLGA7Q7Z5G4 137 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 ADCK2Q7Z695 626 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 PARGQ86W56 976 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SFTPA1Q8IWL2 248 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 KIR2DL5AQ8N109 375 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 BPIFB2Q8N4F0 458 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 C2orf73Q8N5S3 287 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SIRT6Q8N6T7 355 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 ZSCAN4Q8NAM6 433 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 ZNF548Q8NEK5 533 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 ZNF555Q8NEP9 628 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 OR7G2Q8NG99 324 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 OR4D9Q8NGE8 314 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 OR9Q2Q8NGE9 314 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SLC7A13Q8TCU3 470 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 STYXQ8WUJ0 223 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SKA2Q8WVK7 121 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 PHYHIPLQ96FC7 376 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 DTD2Q96FN9 168 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 MRAP2Q96G30 205 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SLC35E1Q96K37 410 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 ACOX2Q99424 681 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SIGMAR1Q99720 223 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 ARHGDIGQ99819 225 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 NRIP2Q9BQI9 281 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 TIMM29Q9BSF4 260 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 FAAP24Q9BTP7 215 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 TMEM43Q9BTV4 400 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 RSG1Q9BU20 258 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 PBDC1Q9BVG4 233 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 MS4A8Q9BY19 250 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 OR2J1Q9GZK6 312 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SYT4Q9H2B2 425 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 OR51J1Q9H342 316 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 SRMSQ9H3Y6 488 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 AKIRIN1Q9H9L7 192 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 ZBTB20Q9HC78 741 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 LYRM4Q9HD34 91 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 Q9N2J8 555 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 RAB18Q9NP72 206 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 LYRM2Q9NU23 88 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 B3GAT1Q9P2W7 334 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 PRODH2Q9UF12 536 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 KCNK6Q9Y257 313 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 MRPS33Q9Y291 106 aaKnown RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 TSSC4Q9Y5U2 329 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-227ENST00000554491 FLVCR1Q9Y5Y0 555 aa3.87□□□□□ -1.79
ATXN3-227ENST00000554491 CDH10Q9Y6N8 788 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms