RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 METTL11BQ5VVY1 283 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 SFRP4Q6FHJ7 346 aaPredicted RBP5.47□□□□□ -1.53
SLIRP-203ENST00000554074 METAP1DQ6UB28 335 aaPredicted RBP5.47□□□□□ -1.53
SLIRP-203ENST00000554074 BRD3OSQ6XYD6 125 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 KRT74Q7RTS7 529 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 DPY19L4Q7Z388 723 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 FAM90A1Q86YD7 464 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 C11orf53Q8IXP5 236 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 TIGD4Q8IY51 512 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 GALNT4Q8N4A0 578 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 KIR3DL3Q8N743 410 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 LY6G5BQ8NDX9 201 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 C19orf18Q8NEA5 215 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 OR1M1Q8NGA1 313 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 OR10Z1Q8NGY1 313 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 OR6N2Q8NGY6 317 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 OR8S1Q8NH09 359 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 OR4F5Q8NH21 305 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 SSMEM1Q8WWF3 244 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 GATAD2BQ8WXI9 593 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 ZDHHC16Q969W1 377 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 TMIGD2Q96BF3 282 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 REEP6Q96HR9 211 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 WDFY2Q96P53 400 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 PCGF1Q9BSM1 259 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 ABHD6Q9BV23 337 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 DNTTIP1Q9H147 329 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 OR10A2Q9H208 303 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 SEMA6AQ9H2E6 1030 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 NIPAL2Q9H841 368 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 SMURF1Q9HCE7 757 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 ACOXLQ9NUZ1 547 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 RPUSD1Q9UJJ7 312 aaKnown RBP5.47□□□□□ -1.53
SLIRP-203ENST00000554074 MPC1Q9Y5U8 109 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 KPTNQ9Y664 436 aa5.47□□□□□ -1.53
SLIRP-203ENST00000554074 IGHV1-69DA0A0B4J2H0 117 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 A0A1B0GVI7 797 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 MDFIC2A0A1B0GVS7 189 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 FAM181BA6NEQ2 426 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 SAC3D1A6NKF1 404 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 FAM183AA6NL82 134 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 TMEM210A6NLX4 147 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 ANXA2P2A6NMY6 339 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 ZAR1LA6NP61 321 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.46□□□□□ -1.54
SLIRP-203ENST00000554074 TBX1O43435 398 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 MPZL2O60487 215 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 FCN3O75636 299 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 CST4P01036 141 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 IGHV1-69P01742 117 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 GYPAP02724 150 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 ANXA2P07355 339 aaKnown RBP5.46□□□□□ -1.54
SLIRP-203ENST00000554074 SFTPBP07988 381 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 MELTFP08582 738 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 MDKP21741 143 aaPredicted RBP5.46□□□□□ -1.54
SLIRP-203ENST00000554074 GNALP38405 381 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 TGM4P49221 684 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF121P58317 390 aaPredicted RBP5.46□□□□□ -1.54
SLIRP-203ENST00000554074 PSMA6P60900 246 aaKnown RBP5.46□□□□□ -1.54
SLIRP-203ENST00000554074 CDC42P60953 191 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 SLC34A1Q06495 639 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 TMED1Q13445 227 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 GINS1Q14691 196 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 PTGES3Q15185 160 aaKnown RBP5.46□□□□□ -1.54
SLIRP-203ENST00000554074 CDONQ4KMG0 1287 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 KLHL12Q53G59 568 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 FAM76BQ5HYJ3 339 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 SLC35D3Q5M8T2 416 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 SLC25A30Q5SVS4 291 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 OGFRL1Q5TC84 451 aaPredicted RBP5.46□□□□□ -1.54
SLIRP-203ENST00000554074 SLX4IPQ5VYV7 408 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 WDR82Q6UXN9 313 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF826PQ6ZT77 177 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 FAM57BQ71RH2 274 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 SPATC1Q76KD6 591 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 BTN2A1Q7KYR7 527 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 SLC36A1Q7Z2H8 476 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 WDR86Q86TI4 376 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 LDLRAD3Q86YD5 345 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 ERI1Q8IV48 349 aaKnown RBP5.46□□□□□ -1.54
SLIRP-203ENST00000554074 HS3ST5Q8IZT8 346 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 CBR4Q8N4T8 237 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 BOLLQ8N9W6 283 aaKnown RBP5.46□□□□□ -1.54
SLIRP-203ENST00000554074 OTOSQ8NHW6 89 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 C8orf46Q8TAG6 207 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 TBC1D15Q8TC07 691 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 NPRL2Q8WTW4 380 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 LRRC29Q8WV35 223 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 DYRK2Q92630 601 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 ITPKCQ96DU7 683 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 HRASLS5Q96KN8 279 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 CIB1Q99828 191 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 MICU1Q9BPX6 476 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 RTL8AQ9BWD3 113 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 PAPOLGQ9BWT3 736 aaKnown RBP5.46□□□□□ -1.54
SLIRP-203ENST00000554074 CNTD2Q9H8S5 307 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 BEX1Q9HBH7 125 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 C1RLQ9NZP8 487 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 ZNF319Q9P2F9 582 aa5.46□□□□□ -1.54
SLIRP-203ENST00000554074 SOX21Q9Y651 276 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms