RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 PIGGQ5H8A4 983 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 TIMM23BQ5SRD1 257 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 MARC1Q5VT66 337 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 METTL21CQ5VZV1 264 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 LPCAT4Q643R3 524 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 NIPAL1Q6NVV3 410 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 MED27Q6P2C8 311 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 TTC33Q6PID6 262 aaPredicted RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 PLET1Q6UQ28 207 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 NPSR1Q6W5P4 371 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 NCCRP1Q6ZVX7 275 aaPredicted RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 TMEM179BQ7Z7N9 219 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 MRPL52Q86TS9 123 aaKnown RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 C17orf82Q86X59 251 aaPredicted RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 TMEM25Q86YD3 366 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 ZFP82Q8N141 532 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 CYP4Z2PQ8N1L4 340 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 Q8N402 240 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 OR4K17Q8NGC6 315 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 OR11H7Q8NGC8 314 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 OR10W1Q8NGF6 305 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 OR8K1Q8NGG5 319 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 OR2G3Q8NGZ4 309 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 RHOXF1Q8NHV9 184 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 NT5CQ8TCD5 201 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 BLOC1S5Q8TDH9 187 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 C22orf15Q8WYQ4 148 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 ESR2Q92731 530 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 RORBQ92753 470 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 RERGQ96A58 199 aaPredicted RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 PPWD1Q96BP3 646 aaKnown RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 WDR34Q96EX3 536 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 MRAP2Q96G30 205 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 CCDC42Q96M95 316 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 SIGLEC12Q96PQ1 595 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 GPR22Q99680 433 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 KIR2DL4Q99706 377 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 ARHGDIGQ99819 225 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 RASL11BQ9BPW5 248 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 TMEM208Q9BTX3 173 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 SLC19A3Q9BZV2 496 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 ARL6Q9H0F7 186 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 SH2D2AQ9NP31 389 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 DDIT4Q9NX09 232 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 FAM206AQ9NX38 181 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 DNAJC27Q9NZQ0 273 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 DEC1Q9P2X7 70 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 CLCF1Q9UBD9 225 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 PCYOX1Q9UHG3 505 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 TFR2Q9UP52 801 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 ACOT9Q9Y305 439 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 TBL2Q9Y4P3 447 aaKnown RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 ORC6Q9Y5N6 252 aa1.66□□□□□ -2.14
SRP54-204ENST00000553923 USP42Q9H9J4 1324 aaKnown RBP1.66□□□□□ -2.14
SRP54-204ENST00000553923 CEMIPQ8WUJ3 1361 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 A0A087WWV3 80 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 TRAV39A0A0B4J263 110 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 IGHV2OR16-5A0A0B4J2B6 119 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 IGHV3-35A0A0C4DH35 117 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 A0A0J9YXY3 114 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 A0A1B0GX12 115 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 OR2AT4A6NND4 320 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 TMEM114B3SHH9 223 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 LRRN3E7EW58 273 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 TNFRSF11BO00300 401 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 GPR171O14626 319 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 CDIPTO14735 213 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 HAT1O14929 419 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 UBDO15205 165 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 CRXO43186 299 aaPredicted RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 TGOLN2O43493 480 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 HCRTR1O43613 425 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 SSNA1O43805 119 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 ZNF354AO60765 605 aaPredicted RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 ENTPD6O75354 484 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 UPK1BO75841 260 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 RBBP9O75884 186 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 DHRS3O75911 302 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 RPP14O95059 124 aaKnown RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 ASS1P00966 412 aaKnown RBP1.65□□□□□ -2.15
SRP54-204ENST00000553923 IFNA5P01569 189 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 CD8AP01732 235 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 IGHV3-48P01763 117 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 TNNC2P02585 160 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 RLN2P04090 185 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 SEMG1P04279 462 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 IFNA6P05013 189 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 CALB1P05937 261 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 HPNP05981 417 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 BCHEP06276 602 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 GNAO1P09471 354 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 CD1EP15812 388 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 ATF6P18850 670 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 CELP19835 753 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 FUT3P21217 361 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 ZP3P21754 424 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 HOXA6P31267 233 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 DRD3P35462 400 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 TALDO1P37837 337 aa1.65□□□□□ -2.15
SRP54-204ENST00000553923 CDKN2BP42772 138 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms