RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 RAB1AP62820 205 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 ECH1Q13011 328 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 ZNF169Q14929 603 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 ZNF124Q15973 351 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 HACD4Q5VWC8 232 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 DNM1P46Q6ZS02 220 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 ZADH2Q8N4Q0 377 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 CHST4Q8NCG5 386 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 SEMA6DQ8NFY4 1073 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 CHST5Q9GZS9 411 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 PRDM14Q9GZV8 571 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 RANGRFQ9HD47 186 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 CLCF1Q9UBD9 225 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 A0A0A6YYJ9 748 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 H7C417 338 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 GNB3P16520 340 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 PRSS3P35030 304 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 THBS4P35443 961 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 EIF2S3P41091 472 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 MRPS15P82914 257 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 DYRK1AQ13627 763 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 HLXQ14774 488 aaPredicted RBP11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 C9orf106Q8NAJ2 232 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 SNIP1Q8TAD8 396 aaKnown RBP11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 CREB3L1Q96BA8 519 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 ITPKCQ96DU7 683 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 SEH1LQ96EE3 360 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 MTFP1Q9UDX5 166 aa11.06□□□□□ -0.64
VIPAS39-206ENST00000553888 IGKV1-27A0A075B6S5 117 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 FAM230AA0A1W2PPH8 454 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 TMEM14DPA8MWL7 114 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 RBBP9O75884 186 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 NGFP01138 241 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 APOC1P02654 83 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 ERCC1P07992 297 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 FAM3AP98173 230 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 FOXF2Q12947 444 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 LINC00303Q3SY05 128 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 MYPOPQ86VE0 399 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 CNEP1R1Q8N9A8 125 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 OR4C16Q8NGL9 310 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 NUDCD2Q8WVJ2 157 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 OR10A4Q9H209 315 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 TP63Q9H3D4 680 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 POFUT1Q9H488 388 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 RAB22AQ9UL26 194 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 SOCS1O15524 211 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 CRTAPO75718 401 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 CD3DP04234 171 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 GSK3AP49840 483 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 FBXW9Q5XUX1 488 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 VWA1Q6PCB0 445 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 FGD2Q7Z6J4 655 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 ZGRF1Q86YA3 2104 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 BATF2Q8N1L9 274 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 GVQW1Q8N7I0 195 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 OR4S1Q8NGB4 309 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 AIFM2Q9BRQ8 373 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 LPAR5Q9H1C0 372 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 ING4Q9UNL4 249 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 IGF2RP11717 2491 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 ZZEF1O43149 2961 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 HMX3A6NHT5 357 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 SPRY1O43609 319 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 ANGPTL7O43827 346 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 GFRA3O60609 400 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 LYZL6O75951 148 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 GTF2F2P13984 249 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 SELLP14151 372 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 STOMP27105 288 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 ZNF585AQ6P3V2 769 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 Q6ZTK2 550 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 RBMXL3Q8N7X1 1067 aaKnown RBP11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 OR56B4Q8NH76 319 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 GPX8Q8TED1 209 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 TNFAIP8L1Q8WVP5 186 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 SELENOIQ9C0D9 397 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 C20orf85Q9H1P6 137 aa11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 ELL3Q9HB65 397 aaPredicted RBP11.05□□□□□ -0.64
VIPAS39-206ENST00000553888 hCG_38984A0A1B0GV85 526 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 M0QYG6 137 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 CDC14BO60729 498 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 RAD51DO75771 328 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 CELA3BP08861 270 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 PRF1P14222 555 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 SERPINA2P20848 420 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 MRPS10P82664 201 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 Q3ZCU0 254 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 Q6ZSR3 168 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 OR1K1Q8NGR3 316 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 ZNF581Q9P0T4 197 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 SMLR1H3BR10 107 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 AQP7O14520 342 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 RAB6AP20340 208 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 HLA-DMAP28067 261 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 PTGFRP43088 359 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 OR3A2P47893 321 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 RIPPLY1Q0D2K3 151 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 ZNF260Q3ZCT1 412 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 CDNFQ49AH0 187 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms