RNA–Protein interactions for RNA: ENST00000553746.1

ATL1-204, Transcript of atlastin GTPase 1, humanhuman

TSL 2

Gene ATL1, Length 370 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-204ENST00000553746 DDX19BQ9UMR2 479 aa0.53□□□□□ -2.32
ATL1-204ENST00000553746 HES2Q9Y543 173 aa0.53□□□□□ -2.32
ATL1-204ENST00000553746 LRRC42Q9Y546 428 aa0.53□□□□□ -2.32
ATL1-204ENST00000553746 PLEKHG2Q9H7P9 1386 aa0.53□□□□□ -2.32
ATL1-204ENST00000553746 TARBP1Q13395 1621 aaKnown RBP0.53□□□□□ -2.33
ATL1-204ENST00000553746 TNRC6CQ9HCJ0 1690 aaKnown RBP0.53□□□□□ -2.33
ATL1-204ENST00000553746 UNC13AQ9UPW8 1703 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 ABCA4P78363 2273 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 IGKV1D-43A0A0B4J1Z2 117 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 A0A0J9YXV3 536 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 ISPDA4D126 451 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 FKBP6O75344 327 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 IFNB1P01574 187 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 SERPIND1P05546 499 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 IQCF3P0C7M6 154 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 THRAP10827 490 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 MCF2P10911 925 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 ATP1B2P14415 290 aaPredicted RBP0.52□□□□□ -2.33
ATL1-204ENST00000553746 NELFEP18615 380 aaKnown RBP0.52□□□□□ -2.33
ATL1-204ENST00000553746 TMED10P49755 219 aaKnown RBP0.52□□□□□ -2.33
ATL1-204ENST00000553746 CCNHP51946 323 aaPredicted RBP0.52□□□□□ -2.33
ATL1-204ENST00000553746 KLF3P57682 345 aaPredicted RBP0.52□□□□□ -2.33
ATL1-204ENST00000553746 ART3Q13508 389 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 NCF4Q15080 339 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 CFAP157Q5JU67 520 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 MRPL2Q5T653 305 aaKnown RBP0.52□□□□□ -2.33
ATL1-204ENST00000553746 N4BP2L1Q5TBK1 243 aaPredicted RBP0.52□□□□□ -2.33
ATL1-204ENST00000553746 FAM131AQ6UXB0 335 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 TMPRSS11AQ6ZMR5 421 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 RTL4Q6ZR62 310 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 NPWQ8N729 165 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 C19orf18Q8NEA5 215 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 OR4C13Q8NGP0 309 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 OR6Q1Q8NGQ2 317 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 OR1S2Q8NGQ3 325 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 OR1L4Q8NGR5 311 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 CCDC126Q96EE4 140 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 SAMD10Q9BYL1 202 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 RAB33BQ9H082 229 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 RSPH9Q9H1X1 276 aaPredicted RBP0.52□□□□□ -2.33
ATL1-204ENST00000553746 DSN1Q9H410 356 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 MTFP1Q9UDX5 166 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 KANK1Q14678 1352 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 GPRASP1Q5JY77 1395 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 CFTRP13569 1480 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 CAMSAP2Q08AD1 1489 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 MLH3Q9UHC1 1453 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 PEG3Q9GZU2 1588 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 REREQ9P2R6 1566 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 PAPPAQ13219 1627 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 USP32Q8NFA0 1604 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 THSD7AQ9UPZ6 1657 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 TJP1Q07157 1748 aa0.52□□□□□ -2.33
ATL1-204ENST00000553746 TNS1Q9HBL0 1735 aaKnown RBP0.52□□□□□ -2.33
ATL1-204ENST00000553746 TRGV4A0A0C4DH28 118 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 SSC5DA1L4H1 1573 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 MYBPHLA2RUH7 354 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 CROCC2H7BZ55 1655 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 NRASP01111 189 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 HRASP01112 189 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 KRASP01116 189 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 IGHG2P01859 326 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 COL4A1P02462 1669 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 KITLGP21583 273 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 PRKACBP22694 351 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 IL32P24001 234 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 ACAA2P42765 397 aaKnown RBP0.51□□□□□ -2.33
ATL1-204ENST00000553746 CRYBB2P43320 205 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 ADAMTS12P58397 1594 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 TAS2R46P59540 309 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 STXBP1P61764 594 aaKnown RBP0.51□□□□□ -2.33
ATL1-204ENST00000553746 DDX39BQ13838 428 aaKnown RBP0.51□□□□□ -2.33
ATL1-204ENST00000553746 WRNQ14191 1432 aaPredicted RBP eCLIP0.51□□□□□ -2.33
ATL1-204ENST00000553746 CCDC184Q52MB2 194 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 XKR7Q5GH72 579 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 C6orf226Q5I0X4 101 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 ATAD3BQ5T9A4 648 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 FAM104BQ5XKR9 115 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 KCTD16Q68DU8 428 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 ZNF322Q6U7Q0 402 aaPredicted RBP0.51□□□□□ -2.33
ATL1-204ENST00000553746 CD300LGQ6UXG3 332 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 MROH5Q6ZUA9 1318 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 SSH2Q76I76 1423 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 ASXL1Q8IXJ9 1541 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 CPNE9Q8IYJ1 553 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 ORMDL3Q8N138 153 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 LRRC75A-AS1Q8N1F1 130 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 MS4A15Q8N5U1 240 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 ZNF645Q8N7E2 425 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 SPATA4Q8NEY3 305 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 OR1L6Q8NGR2 347 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 OR4K13Q8NH42 304 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 ZNF420Q8TAQ5 688 aaPredicted RBP0.51□□□□□ -2.33
ATL1-204ENST00000553746 APH1BQ8WW43 257 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 HAUS1Q96CS2 278 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 KCNS3Q9BQ31 491 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 TMEM243Q9BU79 118 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 TRIM4Q9C037 500 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 DYRK4Q9NR20 520 aa0.51□□□□□ -2.33
ATL1-204ENST00000553746 UGGT1Q9NYU2 1555 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms