RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ENPP5Q9UJA9 477 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.17■□□□□ 0.66
TDP1-206ENST00000553569 ATP6V1G2O95670 118 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 HTR1AP08908 422 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 MDH2P40926 338 aaKnown RBP19.17■□□□□ 0.66
TDP1-206ENST00000553569 CSNK2BP67870 215 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 DMRTC1Q5HYR2 192 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 CEP78Q5JTW2 689 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 SPICQ8N5J4 248 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 C19orf18Q8NEA5 215 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 OR1M1Q8NGA1 313 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 OR14K1Q8NGZ2 314 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 OR2G2Q8NGZ5 317 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 OR5P3Q8WZ94 311 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 HIST1H2AAQ96QV6 131 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 MYCBPQ99417 103 aaPredicted RBP19.17■□□□□ 0.66
TDP1-206ENST00000553569 FGF23Q9GZV9 251 aaPredicted RBP19.17■□□□□ 0.66
TDP1-206ENST00000553569 FGF20Q9NP95 211 aaPredicted RBP19.17■□□□□ 0.66
TDP1-206ENST00000553569 RNF7Q9UBF6 113 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 KCNS2Q9ULS6 477 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 PCDHB10Q9UN67 800 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 V9GYS6 101 aa19.17■□□□□ 0.66
TDP1-206ENST00000553569 LOC107986453A0A1B0GWG9 222 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 IRGMA1A4Y4 181 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 A6NIN4 97 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 SYT7O43581 403 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 CCL1P22362 96 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 THBS2P35442 1172 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 NANOS3P60323 173 aaKnown RBP19.16■□□□□ 0.66
TDP1-206ENST00000553569 ZNF154Q13106 437 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 TMEM155Q4W5P6 130 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 ZBTB37Q5TC79 503 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 PLCXD3Q63HM9 321 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 MOB3CQ70IA8 216 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 LRRC28Q86X40 367 aaPredicted RBP19.16■□□□□ 0.66
TDP1-206ENST00000553569 SYS1Q8N2H4 156 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 KLHL36Q8N4N3 616 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 C1orf159Q96HA4 380 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 RNF170Q96K19 258 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 ZNF649Q9BS31 505 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 PLEKHA1Q9HB21 404 aa19.16■□□□□ 0.66
TDP1-206ENST00000553569 PPIAL4EA0A075B759 164 aa19.15■□□□□ 0.66
TDP1-206ENST00000553569 B4DSR2 109 aa19.15■□□□□ 0.66
TDP1-206ENST00000553569 PPIAL4DF5H284 164 aa19.15■□□□□ 0.66
TDP1-206ENST00000553569 LMX1BO60663 402 aa19.15■□□□□ 0.66
TDP1-206ENST00000553569 UBCP0CG48 685 aaKnown RBP19.15■□□□□ 0.66
TDP1-206ENST00000553569 PPIAL4FP0DN26 164 aa19.15■□□□□ 0.66
TDP1-206ENST00000553569 CD80P33681 288 aa19.15■□□□□ 0.66
TDP1-206ENST00000553569 GPM6AP51674 278 aa19.15■□□□□ 0.66
TDP1-206ENST00000553569 RDH10Q8IZV5 341 aa19.15■□□□□ 0.66
TDP1-206ENST00000553569 MUC20Q8N307 709 aaPredicted RBP19.15■□□□□ 0.66
TDP1-206ENST00000553569 ITFG2Q969R8 447 aa19.15■□□□□ 0.66
TDP1-206ENST00000553569 METTL17Q9H7H0 456 aaPredicted RBP19.15■□□□□ 0.66
TDP1-206ENST00000553569 GPR173Q9NS66 373 aa19.15■□□□□ 0.66
TDP1-206ENST00000553569 FRRS1LQ9P0K9 344 aa19.15■□□□□ 0.66
TDP1-206ENST00000553569 PPIAL4AQ9Y536 164 aa19.15■□□□□ 0.66
TDP1-206ENST00000553569 FN1P02751 2386 aaKnown RBP19.15■□□□□ 0.66
TDP1-206ENST00000553569 H0YJX3 145 aa19.14■□□□□ 0.65
TDP1-206ENST00000553569 NRASP01111 189 aa19.14■□□□□ 0.65
TDP1-206ENST00000553569 LIMS3P0CW19 117 aa19.14■□□□□ 0.65
TDP1-206ENST00000553569 LIMS4P0CW20 117 aa19.14■□□□□ 0.65
TDP1-206ENST00000553569 DCKP27707 260 aa19.14■□□□□ 0.65
TDP1-206ENST00000553569 ETV1P50549 477 aa19.14■□□□□ 0.65
TDP1-206ENST00000553569 LAIR2Q6ISS4 152 aa19.14■□□□□ 0.65
TDP1-206ENST00000553569 FDX2Q6P4F2 183 aa19.14■□□□□ 0.65
TDP1-206ENST00000553569 IZUMO2Q6UXV1 221 aa19.14■□□□□ 0.65
TDP1-206ENST00000553569 DEFB108BQ8NET1 73 aa19.14■□□□□ 0.65
TDP1-206ENST00000553569 RPL3LQ92901 407 aaKnown RBP19.14■□□□□ 0.65
TDP1-206ENST00000553569 JAM3Q9BX67 310 aa19.14■□□□□ 0.65
TDP1-206ENST00000553569 TMEM210A6NLX4 147 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 CEACAM18A8MTB9 384 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 C3orf80F5H4A9 247 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 XPNPEP2O43895 674 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 MSMBP08118 114 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 MYL12AP19105 171 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 RIPK1Q13546 671 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 ALKBH1Q13686 389 aaKnown RBP19.13■□□□□ 0.65
TDP1-206ENST00000553569 CEACAM21Q3KPI0 293 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 CLVS2Q5SYC1 327 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 SFRP4Q6FHJ7 346 aaPredicted RBP19.13■□□□□ 0.65
TDP1-206ENST00000553569 Q6ZSR3 168 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 C11orf53Q8IXP5 236 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 BPIFB6Q8NFQ5 453 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 OR51F2Q8NH61 342 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 FBLIM1Q8WUP2 373 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 LRRC29Q8WV35 223 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 GGHQ92820 318 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 PATZ1Q9HBE1 687 aaKnown RBP19.13■□□□□ 0.65
TDP1-206ENST00000553569 TMEM165Q9HC07 324 aa19.13■□□□□ 0.65
TDP1-206ENST00000553569 DIMT1Q9UNQ2 313 aaKnown RBP19.13■□□□□ 0.65
TDP1-206ENST00000553569 SONP18583 2426 aaKnown RBP19.13■□□□□ 0.65
TDP1-206ENST00000553569 NSD1Q96L73 2696 aaPredicted RBP19.12■□□□□ 0.65
TDP1-206ENST00000553569 DHRS7CA6NNS2 312 aa19.12■□□□□ 0.65
TDP1-206ENST00000553569 ZNF732B4DXR9 585 aa19.12■□□□□ 0.65
TDP1-206ENST00000553569 E9PI62 339 aa19.12■□□□□ 0.65
TDP1-206ENST00000553569 CDIPTO14735 213 aa19.12■□□□□ 0.65
TDP1-206ENST00000553569 EGR1P18146 543 aa19.12■□□□□ 0.65
TDP1-206ENST00000553569 GBX2P52951 348 aaPredicted RBP19.12■□□□□ 0.65
TDP1-206ENST00000553569 GNG3P63215 75 aa19.12■□□□□ 0.65
TDP1-206ENST00000553569 ZNF404Q494X3 552 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms