RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 TMEM269A0A1B0GVZ9 245 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 RPP14O95059 124 aaKnown RBP19.81■□□□□ 0.76
TDP1-205ENST00000553527 PNPP00491 289 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 CCDC159P0C7I6 412 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 SEC61A1P61619 476 aaKnown RBP19.81■□□□□ 0.76
TDP1-205ENST00000553527 SRSF2Q01130 221 aaKnown RBP19.81■□□□□ 0.76
TDP1-205ENST00000553527 TMEM155Q4W5P6 130 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 DCAF12L2Q5VW00 463 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 C1orf87Q8N0U7 546 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 MOB1AQ9H8S9 216 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 G6PC2Q9NQR9 355 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 ACOXLQ9NUZ1 547 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 FKBP14Q9NWM8 211 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 FAM206AQ9NX38 181 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 CHCHD3Q9NX63 227 aaKnown RBP19.81■□□□□ 0.76
TDP1-205ENST00000553527 GTF2A1LQ9UNN4 478 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 R4GMQ9 66 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 MXRA5Q9NR99 2828 aa19.81■□□□□ 0.76
TDP1-205ENST00000553527 PPIAL4EA0A075B759 164 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 PPIAL4DF5H284 164 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 LOC110117498-PIK3R3F6TDL0 507 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 PPIAL4FP0DN26 164 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 ZFP36P26651 326 aaKnown RBP19.8■□□□□ 0.76
TDP1-205ENST00000553527 DDOSTP39656 456 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 GATA4P43694 442 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 GSK3AP49840 483 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 HOXA4Q00056 320 aaPredicted RBP19.8■□□□□ 0.76
TDP1-205ENST00000553527 MFGE8Q08431 387 aaPredicted RBP19.8■□□□□ 0.76
TDP1-205ENST00000553527 LIPNQ5VXI9 398 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 KCTD20Q7Z5Y7 419 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 MUC20Q8N307 709 aaPredicted RBP19.8■□□□□ 0.76
TDP1-205ENST00000553527 CELF2-AS1Q8N7Q2 184 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 DEFB108BQ8NET1 73 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 OR8S1Q8NH09 359 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 C4orf36Q96KX1 117 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 METTL17Q9H7H0 456 aaPredicted RBP19.8■□□□□ 0.76
TDP1-205ENST00000553527 PPP1R3EQ9H7J1 279 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 FN3KRPQ9HA64 309 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 TMEM165Q9HC07 324 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 BLOC1S6Q9UL45 172 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 PPIAL4AQ9Y536 164 aa19.8■□□□□ 0.76
TDP1-205ENST00000553527 A0A0G2JMP0 313 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.79■□□□□ 0.76
TDP1-205ENST00000553527 A0A0X1KG70 313 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 CEACAM18A8MTB9 384 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 PTGES3LE9PB15 166 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 J3QLW9 94 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 PHF1O43189 567 aaPredicted RBP19.79■□□□□ 0.76
TDP1-205ENST00000553527 AVPP01185 164 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 LIMS3P0CW19 117 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 LIMS4P0CW20 117 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 ZNF19P17023 458 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 ETV1P50549 477 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 OR12D2P58182 307 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 ZNF181Q2M3W8 571 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 RBM48Q5RL73 367 aaKnown RBP19.79■□□□□ 0.76
TDP1-205ENST00000553527 BCL2L15Q5TBC7 163 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 SYS1Q8N2H4 156 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 OR4M2Q8NGB6 313 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 OR8B12Q8NGG6 310 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 MYDGFQ969H8 173 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 ZNF649Q9BS31 505 aa19.79■□□□□ 0.76
TDP1-205ENST00000553527 LOC105371242A0A075B767 164 aa19.78■□□□□ 0.76
TDP1-205ENST00000553527 hCG_38984A0A1B0GV85 526 aa19.78■□□□□ 0.76
TDP1-205ENST00000553527 ACOD1A6NK06 481 aa19.78■□□□□ 0.76
TDP1-205ENST00000553527 A6NLC8 198 aa19.78■□□□□ 0.76
TDP1-205ENST00000553527 SRSF10O75494 262 aaKnown RBP19.78■□□□□ 0.76
TDP1-205ENST00000553527 FOXH1O75593 365 aa19.78■□□□□ 0.76
TDP1-205ENST00000553527 CFL1P23528 166 aaKnown RBP19.78■□□□□ 0.76
TDP1-205ENST00000553527 ZNF826PQ6ZT77 177 aa19.78■□□□□ 0.76
TDP1-205ENST00000553527 ERGIC1Q969X5 290 aa19.78■□□□□ 0.76
TDP1-205ENST00000553527 TMEM246Q9BRR3 403 aa19.78■□□□□ 0.76
TDP1-205ENST00000553527 PBOV1Q9GZY1 135 aa19.78■□□□□ 0.76
TDP1-205ENST00000553527 C1orf123Q9NWV4 160 aa19.78■□□□□ 0.76
TDP1-205ENST00000553527 METRNQ9UJH8 293 aa19.78■□□□□ 0.76
TDP1-205ENST00000553527 SNX5Q9Y5X3 404 aa19.78■□□□□ 0.76
TDP1-205ENST00000553527 RNF212BA8MTL3 300 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 CDK1P06493 297 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 RPS2P15880 293 aaKnown RBP19.77■□□□□ 0.76
TDP1-205ENST00000553527 CRHBPP24387 322 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 GNALP38405 381 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 PSMB10P40306 273 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 SLC35A2P78381 396 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 ESCO2Q56NI9 601 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 SFRP4Q6FHJ7 346 aaPredicted RBP19.77■□□□□ 0.76
TDP1-205ENST00000553527 TMPRSS11AQ6ZMR5 421 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 C1orf229Q6ZS94 237 aaPredicted RBP19.77■□□□□ 0.76
TDP1-205ENST00000553527 SPERTQ8NA61 448 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 RORBQ92753 470 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 LYZL4Q96KX0 146 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 PAPOLGQ9BWT3 736 aaKnown RBP19.77■□□□□ 0.76
TDP1-205ENST00000553527 TMPRSS13Q9BYE2 586 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 RGCCQ9H4X1 137 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 OCEL1Q9H607 264 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 C7orf69Q9H7B7 122 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 ISG20L2Q9H9L3 353 aaKnown RBP19.77■□□□□ 0.76
TDP1-205ENST00000553527 MMP26Q9NRE1 261 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 C14orf119Q9NWQ9 140 aa19.77■□□□□ 0.76
TDP1-205ENST00000553527 PAK1IP1Q9NWT1 392 aaPredicted RBP19.77■□□□□ 0.76
TDP1-205ENST00000553527 RNF7Q9UBF6 113 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms