RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 F5H5K5 113 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 SOCS2O14508 198 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 ACOT8O14734 319 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 PTP4A3O75365 173 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 NDUFB2O95178 105 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 LCATP04180 440 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 VSIG10L2P0DP72 767 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 IGLL1P15814 213 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 MUC1P15941 1255 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-219ENST00000553488 GGT2P36268 569 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 MDH1P40925 334 aaKnown RBP5.89□□□□□ -1.47
ATXN3-219ENST00000553488 YAP1P46937 504 aaKnown RBP5.89□□□□□ -1.47
ATXN3-219ENST00000553488 TGM4P49221 684 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 ECH1Q13011 328 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 MALLQ13021 153 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 TRAM2Q15035 370 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 LY6EQ16553 131 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 AANATQ16613 207 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 LRRC75BQ2VPJ9 315 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 LRRC23Q53EV4 343 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-219ENST00000553488 STUMQ69YW2 141 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 GPR139Q6DWJ6 353 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 ERICH5Q6P6B1 374 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 MBOAT2Q6ZWT7 520 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 MRPL21Q7Z2W9 205 aaKnown RBP5.89□□□□□ -1.47
ATXN3-219ENST00000553488 VTCN1Q7Z7D3 282 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-219ENST00000553488 NDUFA11Q86Y39 141 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 RNF113BQ8IZP6 322 aaKnown RBP5.89□□□□□ -1.47
ATXN3-219ENST00000553488 CMTM4Q8IZR5 234 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 Q8N2B8 174 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 PAPD5Q8NDF8 572 aaKnown RBP5.89□□□□□ -1.47
ATXN3-219ENST00000553488 WFDC9Q8NEX5 89 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 OR4F17Q8NGA8 305 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 OR56B2PQ8NGI1 322 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 PIFOQ8TCI5 191 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 SLC7A13Q8TCU3 470 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 RORBQ92753 470 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 R3HDM4Q96D70 268 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 SEH1LQ96EE3 360 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 OR4F4Q96R69 305 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 SSX3Q99909 188 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 CITED2Q99967 270 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-219ENST00000553488 PARD6BQ9BYG5 372 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 CYB5R1Q9UHQ9 305 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 RAB21Q9UL25 225 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 OAZ3Q9UMX2 235 aa5.89□□□□□ -1.47
ATXN3-219ENST00000553488 WI2-2373I1.2A0A1W2PRP0 233 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 FAM220BPB1ANY3 271 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 M0R135 149 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 M0R1W7 72 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 IFNA14P01570 189 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 GRPP07492 148 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 PSKH1P11801 424 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 PAX6P26367 422 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 CRABP1P29762 137 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 KDELR2P33947 212 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 SELENOWP63302 87 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 CSNK2BP67870 215 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 HABP2Q14520 560 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-219ENST00000553488 MICBQ29980 383 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 RFX4Q33E94 735 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 GLYATL3Q5SZD4 288 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 ATPAF1Q5TC12 328 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-219ENST00000553488 NCR3LG1Q68D85 454 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 WDR82Q6UXN9 313 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 ZNF730Q6ZMV8 503 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 SLC36A1Q7Z2H8 476 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 TSEN54Q7Z6J9 526 aaKnown RBP5.88□□□□□ -1.47
ATXN3-219ENST00000553488 ZBTB46Q86UZ6 589 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 OR6V1Q8N148 313 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 OR51G2Q8NGK0 314 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 LRRC29Q8WV35 223 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 C12orf43Q96C57 262 aaKnown RBP5.88□□□□□ -1.47
ATXN3-219ENST00000553488 ZNF799Q96GE5 643 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 RSRC1Q96IZ7 334 aaKnown RBP5.88□□□□□ -1.47
ATXN3-219ENST00000553488 TPD52L3Q96J77 140 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 CLPTM1LQ96KA5 538 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 GAFA1Q96PS6 74 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 PITX2Q99697 317 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 FNDC11Q9BVV2 318 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 NPFFR1Q9GZQ6 430 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 TLNRD1Q9H1K6 362 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 OR10A2Q9H208 303 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 METTL8Q9H825 291 aaKnown RBP5.88□□□□□ -1.47
ATXN3-219ENST00000553488 RNPEPL1Q9HAU8 725 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 RAB18Q9NP72 206 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 MRPL22Q9NWU5 206 aaKnown RBP5.88□□□□□ -1.47
ATXN3-219ENST00000553488 B9D1Q9UPM9 204 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 AURKCQ9UQB9 309 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 IER3IP1Q9Y5U9 82 aa5.88□□□□□ -1.47
ATXN3-219ENST00000553488 GGT3PA6NGU5 568 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 BHLHE40O14503 412 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 NDUFB3O43676 98 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 TFF1P04155 84 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 IFNW1P05000 195 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 IFNA8P32881 189 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 OMPP47874 163 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 BMXP51813 675 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 TPTEP56180 551 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms