RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 FAM110BQ8TC76 370 aa3.04□□□□□ -1.92
ATXN3-217ENST00000553287 RNASE8Q8TDE3 154 aaKnown RBP3.04□□□□□ -1.92
ATXN3-217ENST00000553287 ZNF75CPQ92670 426 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-217ENST00000553287 MUCL1Q96DR8 90 aa3.04□□□□□ -1.92
ATXN3-217ENST00000553287 WDR34Q96EX3 536 aa3.04□□□□□ -1.92
ATXN3-217ENST00000553287 VSTM2LQ96N03 204 aa3.04□□□□□ -1.92
ATXN3-217ENST00000553287 OR4F4Q96R69 305 aa3.04□□□□□ -1.92
ATXN3-217ENST00000553287 PELOQ9BRX2 385 aaKnown RBP3.04□□□□□ -1.92
ATXN3-217ENST00000553287 EFCAB11Q9BUY7 163 aa3.04□□□□□ -1.92
ATXN3-217ENST00000553287 ALG9Q9H6U8 611 aa3.04□□□□□ -1.92
ATXN3-217ENST00000553287 FARSBQ9NSD9 589 aaKnown RBP3.04□□□□□ -1.92
ATXN3-217ENST00000553287 MED29Q9NX70 200 aa3.04□□□□□ -1.92
ATXN3-217ENST00000553287 MS4A12Q9NXJ0 267 aa3.04□□□□□ -1.92
ATXN3-217ENST00000553287 RNF11Q9Y3C5 154 aa3.04□□□□□ -1.92
ATXN3-217ENST00000553287 OR10H1Q9Y4A9 318 aa3.04□□□□□ -1.92
ATXN3-217ENST00000553287 SNX5Q9Y5X3 404 aa3.04□□□□□ -1.92
ATXN3-217ENST00000553287 FKBP7Q9Y680 259 aa3.04□□□□□ -1.92
ATXN3-217ENST00000553287 CSMD3Q7Z407 3707 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 IGHV1-18A0A0C4DH31 117 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 GOLGA8QA0A0J9YX86 632 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 GOLGA8OA6NCC3 632 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 C5orf51A6NDU8 294 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 B4DSR2 109 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 SUPT3HB4E1H0 165 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 GOLGA8NF8WBI6 632 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.03□□□□□ -1.92
ATXN3-217ENST00000553287 GOLGA8RI6L899 631 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 hCG_2039718K7EN88 272 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 NDUFS8O00217 210 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 ACOX3O15254 700 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 PIN1P1O15428 100 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 ZNF861PO60384 105 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 ATP6V1G1O75348 118 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 SUPT3HO75486 399 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 UTS2O95399 124 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 PNPP00491 289 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 KRT14P02533 472 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 FGGP02679 453 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 MSMBP08118 114 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 ADRA2AP08913 450 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 OR4A8P0C604 315 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 TSPAN8P19075 237 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 CALCRP30988 508 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 DEKP35659 375 aaKnown RBP3.03□□□□□ -1.92
ATXN3-217ENST00000553287 MAGEA3P43357 314 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 HNMTP50135 292 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 UCP2P55851 309 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 RAB10P61026 200 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 SNRPD2P62316 118 aaKnown RBP3.03□□□□□ -1.92
ATXN3-217ENST00000553287 TPM4P67936 248 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 PSG7Q13046 419 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 BIKQ13323 160 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 IL18R1Q13478 541 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 GABRA6Q16445 453 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 PLPPR5Q32ZL2 321 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 TMEM176BQ3YBM2 270 aaPredicted RBP3.03□□□□□ -1.92
ATXN3-217ENST00000553287 HIKESHIQ53FT3 197 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 TIMM23BQ5SRD1 257 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 FAM45BPQ6NSW5 357 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 SLC48A1Q6P1K1 146 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 TMEM107Q6UX40 140 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 TIFABQ6ZNK6 161 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 LRRC70Q7Z2Q7 622 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 ERI1Q8IV48 349 aaKnown RBP3.03□□□□□ -1.92
ATXN3-217ENST00000553287 ZNF100Q8IYN0 542 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 BPIFB2Q8N4F0 458 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 TMCO5AQ8N6Q1 288 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 FAM45AQ8TCE6 357 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 BCL2L2Q92843 193 aaPredicted RBP3.03□□□□□ -1.92
ATXN3-217ENST00000553287 DLX4Q92988 240 aaPredicted RBP3.03□□□□□ -1.92
ATXN3-217ENST00000553287 YIPF5Q969M3 257 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 EXOSC8Q96B26 276 aaKnown RBP3.03□□□□□ -1.92
ATXN3-217ENST00000553287 TM4SF18Q96CE8 201 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 LRRC58Q96CX6 371 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 CERS2Q96G23 380 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 MS4A14Q96JA4 679 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 ZNF681Q96N22 645 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 EBF4Q9BQW3 602 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 SUCNR1Q9BXA5 334 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 PTGES2Q9H7Z7 377 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 COQ10BQ9H8M1 238 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 FANCFQ9NPI8 374 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 OPN4Q9UHM6 478 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 FZR1Q9UM11 496 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 CHMP2BQ9UQN3 213 aa3.03□□□□□ -1.92
ATXN3-217ENST00000553287 RYR2Q92736 4967 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 TENM2Q9NT68 2774 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 MIF4GDA9UHW6 222 aaKnown RBP3.02□□□□□ -1.93
ATXN3-217ENST00000553287 K7EPI3 171 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 AP3B1O00203 1094 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 KERAO60938 352 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 ZNF189O75820 626 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-217ENST00000553287 MPZL1O95297 269 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 TGDSO95455 350 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 IGHV3-23P01764 117 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 IL3P08700 152 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 TPM1P09493 284 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 PGAM1P18669 254 aa3.02□□□□□ -1.93
ATXN3-217ENST00000553287 CSNK2A2P19784 350 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-217ENST00000553287 COX5AP20674 150 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms