RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 SIGLEC7Q9Y286 467 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 POFUT2Q9Y2G5 429 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 TMEM14AQ9Y6G1 99 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 IGKV6D-21A0A0A0MT36 114 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 TRAV8-4A0A0B4J246 113 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 GOLGA8QA0A0J9YX86 632 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 MGAT4DA6NG13 374 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 IQCF5A8MTL0 148 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 ZNF705GA8MUZ8 300 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-209ENST00000553280 NDUFC2-KCTD14E9PQ53 114 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 MANBAO00462 879 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 SNAI2O43623 268 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 ZNF207O43670 478 aaKnown RBP3.19□□□□□ -1.9
SCFD1-209ENST00000553280 P01737 135 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 MAGP20916 626 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 P2RY2P41231 377 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 KIR3DL2P43630 455 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 RGS6P49758 472 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 C2orf80Q0P641 193 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 MFSD14CQ5VZR4 134 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 KDM4DQ6B0I6 523 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 THOC7Q6I9Y2 204 aaKnown RBP3.19□□□□□ -1.9
SCFD1-209ENST00000553280 OPN5Q6U736 354 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 CYB561D1Q8N8Q1 229 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 OR1J4Q8NGS1 313 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 DCAKDQ8WVC6 231 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 TMEM239Q8WW34 195 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 ZNF414Q96IQ9 312 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 KCNS1Q96KK3 526 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 C18orf15Q96N68 181 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 OR4K3Q96R72 315 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 CIB1Q99828 191 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 C20orf144Q9BQM9 153 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 COPS4Q9BT78 406 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 C8orf17Q9NRJ1 99 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 SDHAF2Q9NX18 166 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 NXT1Q9UKK6 140 aaKnown RBP3.19□□□□□ -1.9
SCFD1-209ENST00000553280 SLC7A11Q9UPY5 501 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 GMEB1Q9Y692 573 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 PIKFYVEQ9Y2I7 2098 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 CROCCQ5TZA2 2017 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 TET2Q6N021 2002 aaPredicted RBP3.19□□□□□ -1.9
SCFD1-209ENST00000553280 MAP3K19Q56UN5 1328 aa3.19□□□□□ -1.9
SCFD1-209ENST00000553280 FAM240AA0A1B0GVK7 77 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 TMEM223A0PJW6 202 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 ERICH2A1L162 156 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 H0YJW9 148 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 ZNF593O00488 134 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-209ENST00000553280 CHST10O43529 356 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 SERPINB7O75635 380 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 HLA-DQA1P01909 254 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 RPN2P04844 631 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 MMP7P09237 267 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-209ENST00000553280 OR56A5P0C7T3 313 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 ZNF688P0C7X2 276 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 C6orf99Q4VX62 202 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 ACTL10Q5JWF8 245 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 Q6P435 159 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 Q6ZR03 302 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 SETD3Q86TU7 594 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-209ENST00000553280 KRTAP11-1Q8IUC1 163 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 LGI3Q8N145 548 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 CDRT4Q8N9R6 151 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 ING5Q8WYH8 240 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 GHSRQ92847 366 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 TIMM29Q9BSF4 260 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 RSG1Q9BU20 258 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 COA1Q9GZY4 146 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 WFDC1Q9HC57 220 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 NECAP2Q9NVZ3 263 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 RAB26Q9ULW5 256 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 AP3M1Q9Y2T2 418 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 WIF1Q9Y5W5 379 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 PTPRTO14522 1441 aa3.18□□□□□ -1.9
SCFD1-209ENST00000553280 IGHV3-72A0A0B4J1Y9 119 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 C5orf63A6NC05 138 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 J3QT63 122 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 hCG_2039718K7EN88 272 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 M0R1B8 84 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 MT-ND4P03905 459 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 IL12BP29460 328 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 ERFP50548 548 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 TAS2R31P59538 309 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 VSNL1P62760 191 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 HHATQ5VTY9 493 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 SAXO2Q658L1 398 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 ZFP2Q6ZN57 461 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 LRRC8AQ8IWT6 810 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 DRAM1Q8N682 238 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 OR10G2Q8NGC3 310 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 OR4M1Q8NGD0 313 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 CDS1Q92903 461 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 Q96MT0 163 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 CTRCQ99895 268 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 GOLPH3Q9H4A6 298 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 PRORYQ9H606 182 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 TMEM100Q9NV29 134 aa3.17□□□□□ -1.9
SCFD1-209ENST00000553280 MRM2Q9UI43 246 aaKnown RBP3.17□□□□□ -1.9
SCFD1-209ENST00000553280 COL16A1Q07092 1604 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-209ENST00000553280 TNS2Q63HR2 1409 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms