RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 SRRM5B3KS81 715 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 C22orf46C9J442 243 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 ZNF670-ZNF695F2Z2N8 137 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 C3orf80F5H4A9 247 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 IRF2P14316 349 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 SRP14P37108 136 aaKnown RBP16.04■□□□□ 0.16
PTCH1-227ENST00000553256 IL5RAQ01344 420 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 ESCO2Q56NI9 601 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 ZBTB37Q5TC79 503 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 LIPNQ5VXI9 398 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 SFRP4Q6FHJ7 346 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-227ENST00000553256 SEMA6DQ8NFY4 1073 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 OR14K1Q8NGZ2 314 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 OR8S1Q8NH09 359 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 SPATA3Q8NHX4 192 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 RORBQ92753 470 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 C9orf16Q9BUW7 83 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 MOB1AQ9H8S9 216 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 SMURF1Q9HCE7 757 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 ABCB9Q9NP78 766 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 KAAG1Q9UBP8 84 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 AASSQ9UDR5 926 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 IKZF2Q9UKS7 526 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 V9GYS6 101 aa16.04■□□□□ 0.16
PTCH1-227ENST00000553256 IGHV2-70DA0A0C4DH43 119 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 ZNF816-ZNF321PA0A0X1KG74 233 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 KIR2DS1A0A191URI9 304 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 CDIPTO14735 213 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 SULT1C4O75897 302 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 MAP2K3P46734 347 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 PITPNBP48739 271 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 ELF3P78545 371 aaPredicted RBP16.03■□□□□ 0.16
PTCH1-227ENST00000553256 CATSPERDQ86XM0 798 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 ENTHD1Q8IYW4 607 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 FTMTQ8N4E7 242 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 RHOXF1Q8NHV9 184 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 SEH1LQ96EE3 360 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 ZNF649Q9BS31 505 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 OR51I2Q9H344 312 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 METRNQ9UJH8 293 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 OR52A1Q9UKL2 312 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 SLC22A13Q9Y226 551 aa16.03■□□□□ 0.16
PTCH1-227ENST00000553256 TMEM210A6NLX4 147 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 LOC110117498-PIK3R3F6TDL0 507 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 SLC16A6O15403 523 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 DHRS3O75911 302 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 PPIAL4GP0DN37 164 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 GNALP38405 381 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 CEACAM21Q3KPI0 293 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 ZDHHC23Q8IYP9 409 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 PRSS35Q8N3Z0 413 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 OR8B3Q8NGG8 313 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 OR10Z1Q8NGY1 313 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 LRRC29Q8WV35 223 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 RAB40AQ8WXH6 277 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 PIGCQ92535 297 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 RFKQ969G6 155 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 OR8B2Q96RD0 313 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 TBX5Q99593 518 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 MICU1Q9BPX6 476 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 EXOGQ9Y2C4 368 aaKnown RBP16.02■□□□□ 0.16
PTCH1-227ENST00000553256 SNX5Q9Y5X3 404 aa16.02■□□□□ 0.16
PTCH1-227ENST00000553256 DOCK11Q5JSL3 2073 aa16.02■□□□□ 0.15
PTCH1-227ENST00000553256 TRAV38-1A0A0B4J264 116 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 A0A1B0GW55 424 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 METTL15A6NJ78 407 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 A6NLC8 198 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 ANXA2P2A6NMY6 339 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 DHRS7CA6NNS2 312 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 NDUFA2O43678 99 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 VENTXO95231 258 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 DUX4L2P0CJ85 424 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 DUX4L3P0CJ86 424 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 DUX4L4P0CJ87 422 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 DUX4L5P0CJ88 424 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 DUX4L6P0CJ89 424 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 DUX4L7P0CJ90 424 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 FAHP16930 419 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 EPHA1P21709 976 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 MTNR1AP48039 350 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 CDONQ4KMG0 1287 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 ATPAF1Q5TC12 328 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-227ENST00000553256 MEDAGQ5VYS4 303 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 DUX4L9Q6RFH8 374 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-227ENST00000553256 ZBTB49Q6ZSB9 765 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 TEX29Q8N6K0 151 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 SCCPDHQ8NBX0 429 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 NANPQ8TBE9 248 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 APH1BQ8WW43 257 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 TMEM158Q8WZ71 300 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 RPL3LQ92901 407 aaKnown RBP16.01■□□□□ 0.15
PTCH1-227ENST00000553256 FAM71F1Q96KD3 344 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-227ENST00000553256 RTL8AQ9BWD3 113 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 FAM118AQ9NWS6 357 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 DUX4Q9UBX2 424 aa16.01■□□□□ 0.15
PTCH1-227ENST00000553256 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.01■□□□□ 0.15
PTCH1-227ENST00000553256 RNF212BA8MTL3 300 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 GYPAP02724 150 aa16■□□□□ 0.15
PTCH1-227ENST00000553256 MUC1P15941 1255 aaPredicted RBP16■□□□□ 0.15
PTCH1-227ENST00000553256 GNB2P62879 340 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms