RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 AWAT1Q58HT5 328 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 TEX36Q5VZQ5 186 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 WDR82Q6UXN9 313 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 BCDIN3DQ7Z5W3 292 aaKnown RBP13.18□□□□□ -0.3
CDK4-215ENST00000553237 FGFRL1Q8N441 504 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 TCEANCQ8N8B7 351 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 PIGCQ92535 297 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 ITPKCQ96DU7 683 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 CCL13Q99616 98 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 TTTY10Q9BZA0 68 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 YIPF3Q9GZM5 350 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 S100A14Q9HCY8 104 aa13.18□□□□□ -0.3
CDK4-215ENST00000553237 A0A1B0GW55 424 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 ZNF879B4DU55 563 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 DVL1O14640 695 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 DUX4L2P0CJ85 424 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 DUX4L3P0CJ86 424 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 DUX4L4P0CJ87 422 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 DUX4L5P0CJ88 424 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 DUX4L6P0CJ89 424 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 DUX4L7P0CJ90 424 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 HKR1P10072 659 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 CFHR2P36980 270 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 IL5RAQ01344 420 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 SLC9A3R2Q15599 337 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 SNCBQ16143 134 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 MICBQ29980 383 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 GPR157Q5UAW9 335 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 RUSC1-AS1Q66K80 236 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 DUX4L9Q6RFH8 374 aaPredicted RBP13.17□□□□□ -0.3
CDK4-215ENST00000553237 C9orf139Q6ZV77 190 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 KCTD8Q6ZWB6 473 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 BTN2A1Q7KYR7 527 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 GALNT4Q8N4A0 578 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 FTMTQ8N4E7 242 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 TMEM163Q8TC26 289 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 ST8SIA4Q92187 359 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 TAF15Q92804 592 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDK4-215ENST00000553237 RPL3LQ92901 407 aaKnown RBP13.17□□□□□ -0.3
CDK4-215ENST00000553237 IL4I1Q96RQ9 567 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 GABARAPL3Q9BY60 117 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 NIPAL2Q9H841 368 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 DUX4Q9UBX2 424 aa13.17□□□□□ -0.3
CDK4-215ENST00000553237 PRR32B1ATL7 298 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.16□□□□□ -0.3
CDK4-215ENST00000553237 EI24O14681 340 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 TOX4O94842 621 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 CST4P01036 141 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 ALPLP05186 524 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 LIPFP07098 398 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 ARF6P62330 175 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 DEFB112Q30KQ8 113 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 WDR38Q5JTN6 314 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 LCN1P1Q5VSP4 162 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 AADACL4Q5VUY2 407 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 KCTD18Q6PI47 426 aaPredicted RBP13.16□□□□□ -0.3
CDK4-215ENST00000553237 MEPCEQ7L2J0 689 aaKnown RBP13.16□□□□□ -0.3
CDK4-215ENST00000553237 CBR4Q8N4T8 237 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 PNLDC1Q8NA58 520 aaKnown RBP13.16□□□□□ -0.3
CDK4-215ENST00000553237 OR5T2Q8NGG2 359 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 FAM81AQ8TBF8 368 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 OR5P3Q8WZ94 311 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 ZDHHC16Q969W1 377 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 SLC25A28Q96A46 364 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 RNF170Q96K19 258 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 TBX15Q96SF7 602 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 RTL8AQ9BWD3 113 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 FGF23Q9GZV9 251 aaPredicted RBP13.16□□□□□ -0.3
CDK4-215ENST00000553237 TLNRD1Q9H1K6 362 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 SNTG1Q9NSN8 517 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 FAM206AQ9NX38 181 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 H2AFY2Q9P0M6 372 aaPredicted RBP13.16□□□□□ -0.3
CDK4-215ENST00000553237 COPS3Q9UNS2 423 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 MPC1Q9Y5U8 109 aa13.16□□□□□ -0.3
CDK4-215ENST00000553237 TMEM269A0A1B0GVZ9 245 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 P2RY10O00398 339 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 MMP9P14780 707 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 MUC1P15941 1255 aaPredicted RBP13.15□□□□□ -0.3
CDK4-215ENST00000553237 FOXL1Q12952 345 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 DMRTC1Q5HYR2 192 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 METTL11BQ5VVY1 283 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 NXNL2Q5VZ03 156 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 ZDHHC23Q8IYP9 409 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 PQLC1Q8N2U9 271 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 FAM216BQ8N7L0 139 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 SCCPDHQ8NBX0 429 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 HPSE2Q8WWQ2 592 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 PPP1R14AQ96A00 147 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 WDFY2Q96P53 400 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 HIST1H2AAQ96QV6 131 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 MROQ9BYG7 248 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 WDR13Q9H1Z4 485 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 ZMAT3Q9HA38 289 aaKnown RBP13.15□□□□□ -0.3
CDK4-215ENST00000553237 TNFRSF19Q9NS68 423 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 USE1Q9NZ43 259 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 KAAG1Q9UBP8 84 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 IKZF2Q9UKS7 526 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 PCDHGB1Q9Y5G3 927 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 ORC6Q9Y5N6 252 aa13.15□□□□□ -0.3
CDK4-215ENST00000553237 CENPVL3A0A0U1RRI6 287 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms