RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 GTF2A1LQ9UNN4 478 aa8.5□□□□□ -1.05
TMEM116-216ENST00000552800 INTS1Q8N201 2190 aaKnown RBP8.49□□□□□ -1.05
TMEM116-216ENST00000552800 A0A1B0GWJ7 208 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 CENPXA8MT69 81 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 DLL1O00548 723 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 MAGEB3O15480 346 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 TPD52L2O43399 206 aaKnown RBP8.49□□□□□ -1.05
TMEM116-216ENST00000552800 ZNF780AO75290 641 aaPredicted RBP8.49□□□□□ -1.05
TMEM116-216ENST00000552800 IGLV1-44P01699 117 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 LCATP04180 440 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 ACAA1P09110 424 aaPredicted RBP8.49□□□□□ -1.05
TMEM116-216ENST00000552800 SPNP16150 400 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 HOXB4P17483 251 aaPredicted RBP8.49□□□□□ -1.05
TMEM116-216ENST00000552800 NAT1P18440 290 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 BTCP35070 178 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 FUT6P51993 359 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 EFNB2P52799 333 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 ZP1P60852 638 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 ZNF92Q03936 586 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 UNC119Q13432 240 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 GPR176Q14439 515 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 ARL6IP1Q15041 203 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 PPA1Q15181 289 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 GSG1Q2KHT4 349 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 TBRG1Q3YBR2 411 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 ZNF260Q3ZCT1 412 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 FAM76BQ5HYJ3 339 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 FBXW12Q6X9E4 464 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 BEND4Q6ZU67 534 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 C8orf86Q6ZUL3 223 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 SSX8Q7RTT4 187 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 P4HA3Q7Z4N8 544 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 TMEM200AQ86VY9 491 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 SAXO1Q8IYX7 474 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 CSNK2A3Q8NEV1 391 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 UBASH3BQ8TF42 649 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 SLC7A6Q92536 515 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 CREB3L1Q96BA8 519 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 MED30Q96HR3 178 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 TRIB1Q96RU8 372 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 TRAF4Q9BUZ4 470 aaPredicted RBP8.49□□□□□ -1.05
TMEM116-216ENST00000552800 ACTR6Q9GZN1 396 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 LPAR5Q9H1C0 372 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 OR10A4Q9H209 315 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 AUNIPQ9H7T9 357 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 RHOFQ9HBH0 211 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 CLEC4AQ9UMR7 237 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 PIGLQ9Y2B2 252 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 CACNG2Q9Y698 323 aa8.49□□□□□ -1.05
TMEM116-216ENST00000552800 PTPRQQ9UMZ3 2332 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 ZNF816-ZNF321PA0A0X1KG74 233 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 WIPF3A6NGB9 483 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 RBBP9O75884 186 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 TOXO94900 526 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 HLA-HP01893 362 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 GSTP1P09211 210 aaKnown RBP8.48□□□□□ -1.05
TMEM116-216ENST00000552800 PATE4P0C8F1 98 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 AZGP1P25311 298 aaKnown RBP8.48□□□□□ -1.05
TMEM116-216ENST00000552800 PRSS3P35030 304 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 GDNFP39905 211 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 SLC6A9P48067 706 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 DGCR2P98153 550 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 PLA2G7Q13093 441 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 SNTB2Q13425 540 aaKnown RBP8.48□□□□□ -1.05
TMEM116-216ENST00000552800 CNN3Q15417 329 aaKnown RBP8.48□□□□□ -1.05
TMEM116-216ENST00000552800 PNLIPRP3Q17RR3 467 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 SFRP5Q5T4F7 317 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 LCE3BQ5TA77 95 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 AGAP6Q5VW22 663 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 LHFPL2Q6ZUX7 228 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 TOMM5Q8N4H5 51 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 WDR31Q8NA23 367 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 OR5L1Q8NGL2 311 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 OR13C9Q8NGT0 318 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 OR52I2Q8NH67 350 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 SEH1LQ96EE3 360 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 WBP1Q96G27 269 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 FAM71F1Q96KD3 344 aaPredicted RBP8.48□□□□□ -1.05
TMEM116-216ENST00000552800 NEDD4LQ96PU5 975 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 SFXN3Q9BWM7 321 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 RNF121Q9H920 327 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 NOX3Q9HBY0 568 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 CGGBP1Q9UFW8 167 aaPredicted RBP8.48□□□□□ -1.05
TMEM116-216ENST00000552800 FAM215AQ9Y5M1 114 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 CELSR3Q9NYQ7 3312 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 CFAP47Q6ZTR5 3102 aa8.48□□□□□ -1.05
TMEM116-216ENST00000552800 C7orf66A4D0T2 115 aa8.47□□□□□ -1.05
TMEM116-216ENST00000552800 EREGO14944 169 aa8.47□□□□□ -1.05
TMEM116-216ENST00000552800 EEF1E1O43324 174 aaKnown RBP8.47□□□□□ -1.05
TMEM116-216ENST00000552800 NRASP01111 189 aa8.47□□□□□ -1.05
TMEM116-216ENST00000552800 GHRHP01286 108 aa8.47□□□□□ -1.05
TMEM116-216ENST00000552800 IGHV3-9P01782 118 aa8.47□□□□□ -1.05
TMEM116-216ENST00000552800 CD74P04233 296 aa8.47□□□□□ -1.05
TMEM116-216ENST00000552800 LPLP06858 475 aa8.47□□□□□ -1.05
TMEM116-216ENST00000552800 TMIGD3P0DMS9 266 aaPredicted RBP8.47□□□□□ -1.05
TMEM116-216ENST00000552800 ZNF35P13682 527 aa8.47□□□□□ -1.05
TMEM116-216ENST00000552800 SPINK2P20155 84 aa8.47□□□□□ -1.05
TMEM116-216ENST00000552800 PSMB1P20618 241 aaKnown RBP8.47□□□□□ -1.05
TMEM116-216ENST00000552800 TMEM50BP56557 158 aa8.47□□□□□ -1.05
TMEM116-216ENST00000552800 MALLQ13021 153 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms