RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 FAM210BQ96KR6 192 aa3.41□□□□□ -1.86
USP44-208ENST00000552440 VPS29Q9UBQ0 182 aa3.41□□□□□ -1.86
USP44-208ENST00000552440 MRPS18CQ9Y3D5 142 aaKnown RBP3.41□□□□□ -1.86
USP44-208ENST00000552440 ZNF142P52746 1687 aaPredicted RBP3.41□□□□□ -1.86
USP44-208ENST00000552440 FGD6Q6ZV73 1430 aa3.41□□□□□ -1.86
USP44-208ENST00000552440 IGHV4-61A0A0C4DH41 118 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 LY6G6EA0A0G2JKS1 128 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 FAM240AA0A1B0GVK7 77 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 DAPL1A0PJW8 107 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 VPS37CA5D8V6 355 aaPredicted RBP3.4□□□□□ -1.86
USP44-208ENST00000552440 CLDN24A6NM45 220 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 NCBP2LA6PVI3 153 aaKnown RBP3.4□□□□□ -1.86
USP44-208ENST00000552440 CEACAM18A8MTB9 384 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 OR11H12B2RN74 326 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 B4DXG7 233 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 F6UB75 175 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 M0QZK8 103 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 NUPL2O15504 423 aaKnown RBP3.4□□□□□ -1.86
USP44-208ENST00000552440 MED6O75586 246 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 SLC2A10O95528 541 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 IGHV4-59P01825 116 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 KLK3P07288 261 aaPredicted RBP3.4□□□□□ -1.86
USP44-208ENST00000552440 FCGR3AP08637 254 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 ELK4P28324 431 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 PYCR1P32322 319 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 RORCP51449 518 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 EFNA3P52797 238 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 BIDP55957 195 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 PSPHP78330 225 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 MRPS11P82912 194 aaKnown RBP3.4□□□□□ -1.86
USP44-208ENST00000552440 IL5RAQ01344 420 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 FASTKQ14296 549 aaKnown RBP3.4□□□□□ -1.86
USP44-208ENST00000552440 LRRC26Q2I0M4 334 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 LRRC75BQ2VPJ9 315 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 PARP15Q460N3 678 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 TECRLQ5HYJ1 363 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 DHFR2Q86XF0 187 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 CCDC71Q8IV32 467 aaPredicted RBP3.4□□□□□ -1.86
USP44-208ENST00000552440 GPD1LQ8N335 351 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 ZADH2Q8N4Q0 377 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 NATD1Q8N6N6 113 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 CLDN22Q8N7P3 220 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 ZNRF1Q8ND25 227 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 OR11H1Q8NG94 326 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 OR4C13Q8NGP0 309 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 OR2A1Q8NGT9 310 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 OR11H2Q8NH07 326 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 MS4A6AQ9H2W1 248 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 CLMPQ9H6B4 373 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 METTL17Q9H7H0 456 aaPredicted RBP3.4□□□□□ -1.86
USP44-208ENST00000552440 EXOSC4Q9NPD3 245 aaKnown RBP3.4□□□□□ -1.86
USP44-208ENST00000552440 MLXQ9UH92 298 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 VPREB3Q9UKI3 123 aa3.4□□□□□ -1.86
USP44-208ENST00000552440 KDM5DQ9BY66 1539 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 DNMT1P26358 1616 aaKnown RBP3.4□□□□□ -1.87
USP44-208ENST00000552440 MROH2AA6NES4 1674 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 EVPLQ92817 2033 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 IGHV2OR16-5A0A0B4J2B6 119 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 TRBV5-4A0A0C4DH59 114 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 ZNF705EA8MWA4 302 aaPredicted RBP3.4□□□□□ -1.87
USP44-208ENST00000552440 F5H5K5 113 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 SMIM24O75264 130 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 KLF8O95600 359 aaPredicted RBP3.4□□□□□ -1.87
USP44-208ENST00000552440 HAND1O96004 215 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 PAK4O96013 591 aaPredicted RBP3.4□□□□□ -1.87
USP44-208ENST00000552440 PPBPP02775 128 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 RBMY1CP0DJD4 496 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 IGHV4-38-2P0DP08 117 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 FOLR1P15328 257 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 PAX1P15863 534 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 IGFBP5P24593 272 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 C1QTNF8P60827 252 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 AP1S1P61966 158 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 ARG2P78540 354 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 ZNF235Q14590 738 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 OR1Q1Q15612 314 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 HIST3H3Q16695 136 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 NSUN5P1Q3KNT7 163 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 OLFML2AQ68BL7 652 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 SPSB3Q6PJ21 355 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 WDR74Q6RFH5 385 aaPredicted RBP3.4□□□□□ -1.87
USP44-208ENST00000552440 SH2D5Q6ZV89 423 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 TMEM135Q86UB9 458 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 SAMD12Q8N8I0 201 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 GATD1Q8NB37 220 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 OR51E1Q8TCB6 317 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 Q8WTZ3 238 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 TCEAL4Q96EI5 215 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 DUX3Q96PT4 197 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 ZNF717Q9BY31 904 aaPredicted RBP3.4□□□□□ -1.87
USP44-208ENST00000552440 NMUR2Q9GZQ4 415 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 COA1Q9GZY4 146 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 RBM38Q9H0Z9 239 aaKnown RBP3.4□□□□□ -1.87
USP44-208ENST00000552440 WDR13Q9H1Z4 485 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 RNF167Q9H6Y7 350 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 EXOSC3Q9NQT5 275 aaKnown RBP3.4□□□□□ -1.87
USP44-208ENST00000552440 ABCC13Q9NSE7 274 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 ZNF256Q9Y2P7 627 aaPredicted RBP3.4□□□□□ -1.87
USP44-208ENST00000552440 OR51B4Q9Y5P0 310 aa3.4□□□□□ -1.87
USP44-208ENST00000552440 RGS12O14924 1447 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms