RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 NAV3Q8IVL0 2385 aa15.53■□□□□ 0.08
PRPF40B-216ENST00000552301 TRAV20A0A0B4J274 112 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 IRGMA1A4Y4 181 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 TMEM210A6NLX4 147 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 J3QRE1 110 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 SYT7O43581 403 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 IGLV3-1P01715 115 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 RPS2P15880 293 aaKnown RBP15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 FAHP16930 419 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 HOXB4P17483 251 aaPredicted RBP15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 PSMB10P40306 273 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 KCNJ8Q15842 424 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 ODF4Q2M2E3 257 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 CR1LQ2VPA4 569 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 CDONQ4KMG0 1287 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 FAM201AQ5SY85 155 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 C8orf59Q8N0T1 100 aaPredicted RBP15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 OR1M1Q8NGA1 313 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 CNIH3Q8TBE1 160 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 RNF170Q96K19 258 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 PATZ1Q9HBE1 687 aaKnown RBP15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 HIF1ANQ9NWT6 349 aa15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 NKX1-2Q9UD57 310 aaPredicted RBP15.52■□□□□ 0.08
PRPF40B-216ENST00000552301 CEACAM18A8MTB9 384 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 H0YAE9 185 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 J3QLW9 94 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 WBP4O75554 376 aaKnown RBP15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 FOXH1O75593 365 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 HTR1AP08908 422 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 UBCP0CG48 685 aaKnown RBP15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 ZNF19P17023 458 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 OR12D2P58182 307 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 ADARB1P78563 741 aaKnown RBP15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 ZNF154Q13106 437 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 ESCO2Q56NI9 601 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 WDR38Q5JTN6 314 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 PLCXD3Q63HM9 321 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 ZNF826PQ6ZT77 177 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 NLRC3Q7RTR2 1065 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 LHFPL3Q86UP9 236 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 DEFB108BQ8NET1 73 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 OR5P3Q8WZ94 311 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 C4orf36Q96KX1 117 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 PPP1R3EQ9H7J1 279 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 TRIM36Q9NQ86 728 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 MIOXQ9UGB7 285 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 HSPE1-MOB4S4R3N1 261 aa15.51■□□□□ 0.07
PRPF40B-216ENST00000552301 DHRS7CA6NNS2 312 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 LGALS8O00214 317 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 PLPP2O43688 288 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 FSTL3O95633 263 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 IGHA1P01876 353 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 CPT2P23786 658 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 CD80P33681 288 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 ISL1P61371 349 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 CSNK2BP67870 215 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 GALEQ14376 348 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 SMN1Q16637 294 aaKnown RBP15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 KRTAP21-3Q3LHN1 58 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 ZNF404Q494X3 552 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 CEP78Q5JTW2 689 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 CLVS2Q5SYC1 327 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 FAM120AOSQ5T036 256 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 MOB3CQ70IA8 216 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 WDR86Q86TI4 376 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 CCDC54Q8NEL0 328 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 OR52I1Q8NGK6 324 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 OR2G2Q8NGZ5 317 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 LRRC29Q8WV35 223 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 HPSE2Q8WWQ2 592 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 POM121Q96HA1 1249 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 VCX3BQ9H321 246 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 TMEM165Q9HC07 324 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 MYRFQ9Y2G1 1151 aa15.5■□□□□ 0.07
PRPF40B-216ENST00000552301 WNK2Q9Y3S1 2297 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 TRAV38-1A0A0B4J264 116 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 A0A0G2JMP0 313 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 A0A0X1KG70 313 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 A0A1B0GTI1 187 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 LOC107986453A0A1B0GWG9 222 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 OR5B21A6NL26 309 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 C3orf80F5H4A9 247 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 H3BSH0 61 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 NRASP01111 189 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 ZNF12P17014 697 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 CCL1P22362 96 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 THBS2P35442 1172 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 GPM6AP51674 278 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 GNG3P63215 75 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 LCN2P80188 198 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 CEACAM21Q3KPI0 293 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 DCDC5Q6ZRR9 648 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 SYS1Q8N2H4 156 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 PRSS35Q8N3Z0 413 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 C19orf18Q8NEA5 215 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 OR4M2Q8NGB6 313 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 OR8B3Q8NGG8 313 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 OR14K1Q8NGZ2 314 aa15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 NEIL1Q96FI4 390 aaPredicted RBP15.49■□□□□ 0.07
PRPF40B-216ENST00000552301 OR8B2Q96RD0 313 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms