RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 POU1F1P28069 291 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 RRM2P31350 389 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 SLC6A6P31641 620 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 SAA4P35542 130 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 FAM3AP98173 230 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 ECH1Q13011 328 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 CRMP1Q14194 572 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 TAF13Q15543 124 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 MAPRE2Q15555 327 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 DGUOKQ16854 277 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 BEAN1Q3B7T3 259 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 CDONQ4KMG0 1287 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 COQ5Q5HYK3 327 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 HCP5Q6MZN7 132 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 PGBD2Q6P3X8 592 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 WDR82Q6UXN9 313 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 SLC16A9Q7RTY1 509 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 DPY19L4Q7Z388 723 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 ZBTB46Q86UZ6 589 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 DYNAPQ8N1N2 210 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 PNLDC1Q8NA58 520 aaKnown RBP5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 SLC37A3Q8NCC5 494 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 OR1M1Q8NGA1 313 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 OR4M1Q8NGD0 313 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 OR8S1Q8NH09 359 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 STON2Q8WXE9 905 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 TNFRSF14Q92956 283 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 SLAMF6Q96DU3 332 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 FAM71F1Q96KD3 344 aaPredicted RBP5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 COG8Q96MW5 612 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 KCNJ15Q99712 375 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 NKX3-1Q99801 234 aaPredicted RBP5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 BTBD10Q9BSF8 475 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 TTTY10Q9BZA0 68 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 FAM107BQ9H098 131 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 TRIM36Q9NQ86 728 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 TUBG2Q9NRH3 451 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 DCAF13Q9NV06 445 aaKnown RBP5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 ARMC1Q9NVT9 282 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 ZNF446Q9NWS9 450 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 ZNRD1Q9P1U0 126 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 KCNG2Q9UJ96 466 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 KLHDC2Q9Y2U9 406 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 COMMD3-BMI1R4GMX3 469 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 TET2Q6N021 2002 aaPredicted RBP5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 DNAH9Q9NYC9 4486 aa5.58□□□□□ -1.52
PRPF40B-214ENST00000551320 TRAV38-1A0A0B4J264 116 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 A0A1W2PRX2 142 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 DHRS12A0PJE2 317 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 ZNF850A8MQ14 1090 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 H3BSH0 61 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 IFNL4K9M1U5 179 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 PSMD9O00233 223 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 ANGPTL7O43827 346 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 AHCYL1O43865 530 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 INMTO95050 263 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 NPPAP01160 153 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 GASTP01350 101 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 SEMG1P04279 462 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 CD28P10747 220 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 NDUFB7P17568 137 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 COX7A1P24310 79 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 GABRA2P47869 451 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 GSSP48637 474 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 CX3CR1P49238 355 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 BMXP51813 675 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 EIF2B1Q14232 305 aaKnown RBP5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 PDCD1Q15116 288 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 TMEM95Q3KNT9 176 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 TM4SF20Q53R12 229 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 CD276Q5ZPR3 534 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 DNM1P34Q6PK57 102 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 CCBE1Q6UXH8 406 aaPredicted RBP5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 KCTD8Q6ZWB6 473 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 LHFPL4Q7Z7J7 247 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 TMEM219Q86XT9 240 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 LDLRAD3Q86YD5 345 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 TMEM86BQ8N661 226 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 KLHDC1Q8N7A1 406 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 ZNRF1Q8ND25 227 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 LY6G5BQ8NDX9 201 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 OR6K6Q8NGW6 343 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 RP9Q8TA86 221 aaKnown RBP5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 SPTSSAQ969W0 71 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 DUS3LQ96G46 650 aaKnown RBP5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 REEP6Q96HR9 211 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 LYZL4Q96KX0 146 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 GAFA1Q96PS6 74 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 SSX3Q99909 188 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 ELAC2Q9BQ52 826 aaKnown RBP5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 PAPOLGQ9BWT3 736 aaKnown RBP5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 MMP28Q9H239 520 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 YY1AP1Q9H869 796 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 KIF17Q9P2E2 1029 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 VPREB3Q9UKI3 123 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 PRPF19Q9UMS4 504 aaKnown RBP5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 POMT1Q9Y6A1 747 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 U3KQV3 271 aa5.57□□□□□ -1.52
PRPF40B-214ENST00000551320 A0A1B0GUS0 222 aa5.56□□□□□ -1.52
PRPF40B-214ENST00000551320 A0A1W2PQ09 198 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms