RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 INTS14Q96SY0 518 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 CDRT15Q96T59 188 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 ELAC2Q9BQ52 826 aaKnown RBP10.53□□□□□ -0.72
PTCH1-221ENST00000550914 ABHD6Q9BV23 337 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 DGCR6LQ9BY27 220 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 SEMA6AQ9H2E6 1030 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 CMC2Q9NRP2 79 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 ZNF446Q9NWS9 450 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 DNAJB11Q9UBS4 358 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 ZNF391Q9UJN7 358 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 RHBDD3Q9Y3P4 386 aa10.53□□□□□ -0.72
PTCH1-221ENST00000550914 RIIAD1A6NNX1 92 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 SIGLEC5O15389 551 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 CST4P01036 141 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 CSF1P09603 554 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 ZNF3P17036 446 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 MSX2P35548 267 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-221ENST00000550914 OPRL1P41146 370 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 ZNF121P58317 390 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-221ENST00000550914 MXRA7P84157 204 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 EGR3Q06889 387 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 FAM57BQ71RH2 274 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 BEND2Q8NDZ0 799 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 OR4Q3Q8NH05 313 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 FAM110DQ8TAY7 271 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-221ENST00000550914 ITFG2Q969R8 447 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 SEH1LQ96EE3 360 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 NDE1Q9NXR1 346 aa10.52□□□□□ -0.73
PTCH1-221ENST00000550914 SLC25A10Q9UBX3 287 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-221ENST00000550914 MEIOCA2RUB1 952 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 ANKRD61A6NGH8 418 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 CLUP10909 449 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 GABRA5P31644 462 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 KLRD1Q13241 179 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 BLMHQ13867 455 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 HERPUD1Q15011 391 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 AANATQ16613 207 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 SLC35E4Q6ICL7 350 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 CD300LDQ6UXZ3 194 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 KRT74Q7RTS7 529 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 ERI1Q8IV48 349 aaKnown RBP10.51□□□□□ -0.73
PTCH1-221ENST00000550914 DTX3Q8N9I9 347 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 AQP11Q8NBQ7 271 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 PAPD5Q8NDF8 572 aaKnown RBP10.51□□□□□ -0.73
PTCH1-221ENST00000550914 OR5T2Q8NGG2 359 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 OR5D13Q8NGL4 314 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 OR6N2Q8NGY6 317 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 ANGPTL6Q8NI99 470 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 OR5P3Q8WZ94 311 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 H1FXQ92522 213 aaKnown RBP10.51□□□□□ -0.73
PTCH1-221ENST00000550914 PGAM5Q96HS1 289 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 GAFA1Q96PS6 74 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 FAM234AQ9H0X4 552 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 WDR13Q9H1Z4 485 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 PPP1R3EQ9H7J1 279 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 DNAJC27Q9NZQ0 273 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 ACTR3BQ9P1U1 418 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 ZNF319Q9P2F9 582 aa10.51□□□□□ -0.73
PTCH1-221ENST00000550914 TRBV23-1A0A0A0MS06 115 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 SNX3O60493 162 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 GLCEO94923 617 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 OPN1MWP04001 364 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 ACAA1P09110 424 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-221ENST00000550914 H2BFMP0C1H6 154 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 OPN1MW2P0DN77 364 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 OPN1MW3P0DN78 364 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 SELLP14151 372 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 GSTT1P30711 240 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 DCTDP32321 178 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 KIR2DS4P43632 304 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 PRDX4Q13162 271 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 GK3PQ14409 553 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 DGUOKQ16854 277 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 MICAQ29983 383 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 GFOD2Q3B7J2 385 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 C16orf89Q6UX73 402 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 Q6ZTK2 550 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 CPLX4Q7Z7G2 160 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 C1QL4Q86Z23 238 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-221ENST00000550914 TIGD4Q8IY51 512 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 ZNF454Q8N9F8 522 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 RPL3LQ92901 407 aaKnown RBP10.5□□□□□ -0.73
PTCH1-221ENST00000550914 PPA2Q9H2U2 334 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 MAGIXQ9H6Y5 334 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 RANBP3Q9H6Z4 567 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-221ENST00000550914 RAB18Q9NP72 206 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 ARMC1Q9NVT9 282 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 NLKQ9UBE8 527 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 TAGLN3Q9UI15 199 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 SF3B6Q9Y3B4 125 aaKnown RBP10.5□□□□□ -0.73
PTCH1-221ENST00000550914 MAB21L2Q9Y586 359 aa10.5□□□□□ -0.73
PTCH1-221ENST00000550914 A0A1W2PQ09 198 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 OR2AT4A6NND4 320 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 ZNF850A8MQ14 1090 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 H3BUX3 64 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 AKR7A2O43488 359 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 SOX14O95416 240 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 LYNP07948 512 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 NDUFB7P17568 137 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms