RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 TGIF2Q9GZN2 237 aa10.85□□□□□ -0.67
NR4A1-215ENST00000550557 SLC22A13Q9Y226 551 aa10.85□□□□□ -0.67
NR4A1-215ENST00000550557 PRF1P14222 555 aa10.85□□□□□ -0.67
NR4A1-215ENST00000550557 RPS2P15880 293 aaKnown RBP10.85□□□□□ -0.67
NR4A1-215ENST00000550557 FAHP16930 419 aa10.85□□□□□ -0.67
NR4A1-215ENST00000550557 MVDP53602 400 aa10.85□□□□□ -0.67
NR4A1-215ENST00000550557 RTP5Q14D33 572 aa10.85□□□□□ -0.67
NR4A1-215ENST00000550557 FBXW9Q5XUX1 488 aa10.85□□□□□ -0.67
NR4A1-215ENST00000550557 TMPRSS11FQ6ZWK6 438 aa10.85□□□□□ -0.67
NR4A1-215ENST00000550557 GNB4Q9HAV0 340 aa10.85□□□□□ -0.67
NR4A1-215ENST00000550557 V9GYH0 126 aa10.85□□□□□ -0.67
NR4A1-215ENST00000550557 FFAR1O14842 300 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 SEMG1P04279 462 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 CCL2P13500 99 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 CA6P23280 308 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 FGF9P31371 208 aaPredicted RBP10.84□□□□□ -0.67
NR4A1-215ENST00000550557 ARTNQ5T4W7 220 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 CDCP2Q5VXM1 449 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 C17orf47Q8NEP4 570 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 OR2AK2Q8NG84 335 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 POC1BQ8TC44 478 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 NXF2Q9GZY0 626 aaKnown RBP10.84□□□□□ -0.67
NR4A1-215ENST00000550557 LOC100289279A0A1B0GTE1 492 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 POM121CA8CG34 1229 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 TERTO14746 1132 aaKnown RBP10.84□□□□□ -0.67
NR4A1-215ENST00000550557 RER1O15258 196 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 SRMP19623 302 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 GPM6AP51674 278 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 CCR9P51686 369 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 FUT6P51993 359 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 GNB1P62873 340 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 NKX6-1P78426 367 aaPredicted RBP10.84□□□□□ -0.67
NR4A1-215ENST00000550557 BTN1A1Q13410 526 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 HMGN3Q15651 99 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 RBPMSQ93062 196 aaKnown RBP10.84□□□□□ -0.67
NR4A1-215ENST00000550557 ZMAT3Q9HA38 289 aaKnown RBP10.84□□□□□ -0.67
NR4A1-215ENST00000550557 SAP30LQ9HAJ7 183 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 CYSLTR2Q9NS75 346 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 RAF1P04049 648 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 ZNF728P0DKX0 622 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 ERGP11308 486 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 CD59P13987 128 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 CHATP28329 748 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 GPR12P47775 334 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 DGCR2P98153 550 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 ALKAL2Q6UX46 152 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 PRSS45Q7RTY3 260 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 CMBLQ96DG6 245 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 MRPS24Q96EL2 167 aaKnown RBP10.84□□□□□ -0.67
NR4A1-215ENST00000550557 RAB19A4D1S5 217 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 DNPH1O43598 174 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 YIF1AO95070 293 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 CTXN2P0C2S0 81 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 CT45A8P0DMV1 189 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 CT45A9P0DMV2 189 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 ZNF17P17021 662 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 TAF9Q16594 264 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 CT45A2Q5DJT8 189 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 FAM214BQ7L5A3 538 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 OR6X1Q8NH79 312 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 COL25A1Q9BXS0 654 aaPredicted RBP10.84□□□□□ -0.67
NR4A1-215ENST00000550557 CACNA1IQ9P0X4 2223 aa10.84□□□□□ -0.67
NR4A1-215ENST00000550557 TSC2P49815 1807 aa10.83□□□□□ -0.67
NR4A1-215ENST00000550557 SCN3AQ9NY46 2000 aa10.83□□□□□ -0.67
NR4A1-215ENST00000550557 LIPT2A6NK58 231 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 PLPP3O14495 311 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 ADAM20O43506 726 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 RPA2P15927 270 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 LAIR2Q6ISS4 152 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 UNQ6494/PRO21346Q6UXR6 183 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 SYS1Q8N2H4 156 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 SDSLQ96GA7 329 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 ISG20L2Q9H9L3 353 aaKnown RBP10.83□□□□□ -0.68
NR4A1-215ENST00000550557 PPP1R3CQ9UQK1 317 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 GABRB1P18505 474 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 OR10A3P58181 314 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 TLE1Q04724 770 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 C19orf12Q9NSK7 152 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 COPS3Q9UNS2 423 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 SSUH2Q9Y2M2 353 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 MAGEB4O15481 346 aaPredicted RBP10.83□□□□□ -0.68
NR4A1-215ENST00000550557 TIAF1O95411 115 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 COX6A1P12074 109 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 CTSSP25774 331 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 ARL3P36405 182 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 UCN2Q96RP3 112 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 SPSB2Q99619 263 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 GCM1Q9NP62 436 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 RPS10P5Q9NQ39 176 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 TMEM82A0PJX8 343 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 NUPL2O15504 423 aaKnown RBP10.83□□□□□ -0.68
NR4A1-215ENST00000550557 LALBAP00709 142 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 HLA-AP01891 365 aaKnown RBP10.83□□□□□ -0.68
NR4A1-215ENST00000550557 HOXB5P09067 269 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 RPS16P62249 146 aaKnown RBP10.83□□□□□ -0.68
NR4A1-215ENST00000550557 P2RY6Q15077 328 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 PPP1R32Q7Z5V6 425 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 SPACA3Q8IXA5 215 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 PP6455Q8WZ26 134 aa10.83□□□□□ -0.68
NR4A1-215ENST00000550557 SEC22CQ9BRL7 303 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms