RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SPATA3Q8NHX4 192 aa14.39□□□□□ -0.11
CHMP1A-208ENST00000550102 NANPQ8TBE9 248 aa14.39□□□□□ -0.11
CHMP1A-208ENST00000550102 LRRC29Q8WV35 223 aa14.39□□□□□ -0.11
CHMP1A-208ENST00000550102 OR5P3Q8WZ94 311 aa14.39□□□□□ -0.11
CHMP1A-208ENST00000550102 PIGCQ92535 297 aa14.39□□□□□ -0.11
CHMP1A-208ENST00000550102 MBOAT4Q96T53 435 aa14.39□□□□□ -0.11
CHMP1A-208ENST00000550102 MRI1Q9BV20 369 aa14.39□□□□□ -0.11
CHMP1A-208ENST00000550102 TLNRD1Q9H1K6 362 aa14.39□□□□□ -0.11
CHMP1A-208ENST00000550102 MMP26Q9NRE1 261 aa14.39□□□□□ -0.11
CHMP1A-208ENST00000550102 OPN4Q9UHM6 478 aa14.39□□□□□ -0.11
CHMP1A-208ENST00000550102 INSIG2Q9Y5U4 225 aa14.39□□□□□ -0.11
CHMP1A-208ENST00000550102 IGHV2-70DA0A0C4DH43 119 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 E9PQ18 207 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 MAGEB4O15481 346 aaPredicted RBP14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 MTRF1O75570 445 aaKnown RBP14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 DHRS3O75911 302 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 PSMB10P40306 273 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 MTNR1AP48039 350 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 ZSCAN26Q16670 478 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 ARMCX4Q5H9R4 360 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 ZBTB37Q5TC79 503 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 MEDAGQ5VYS4 303 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 LYPD2Q6UXB3 125 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 WDR82Q6UXN9 313 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 PLEKHG7Q6ZR37 379 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 ZBTB49Q6ZSB9 765 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 KCTD8Q6ZWB6 473 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 HPSE2Q8WWQ2 592 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 HIST1H2AAQ96QV6 131 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 OCEL1Q9H607 264 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 OR52A1Q9UKL2 312 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 GMPPBQ9Y5P6 360 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 SNX5Q9Y5X3 404 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 AUP1Q9Y679 476 aa14.38□□□□□ -0.11
CHMP1A-208ENST00000550102 SNTNA6NMZ2 147 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 ADAM20O43506 726 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 NDUFA2O43678 99 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 ENTPD6O75354 484 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 FSHBP01225 129 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 LHBP01229 141 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 FAHP16930 419 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 EGR1P18146 543 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 CFHR2P36980 270 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 NPY4RP50391 375 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 ACTC1P68032 377 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 ACTA1P68133 377 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 RIPPLY1Q0D2K3 151 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 OCLNQ16625 522 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 SLC25A30Q5SVS4 291 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 LIPNQ5VXI9 398 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 TEX36Q5VZQ5 186 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 WDR25Q64LD2 544 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 BTNL3Q6UXE8 466 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 FAM220AQ7Z4H9 259 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 FAM90A1Q86YD7 464 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 C11orf53Q8IXP5 236 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 ELMOD2Q8IZ81 293 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 UBE2FQ969M7 185 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 RNF170Q96K19 258 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 TECTBQ96PL2 329 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 ENPP5Q9UJA9 477 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 PIGLQ9Y2B2 252 aa14.37□□□□□ -0.11
CHMP1A-208ENST00000550102 METTL15A6NJ78 407 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 OR5B21A6NL26 309 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 SRRM5B3KS81 715 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 CDIPTO14735 213 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 SULT1C4O75897 302 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 RPP14O95059 124 aaKnown RBP14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 BAG2O95816 211 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 GYPAP02724 150 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 MUC1P15941 1255 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 GPM6AP51674 278 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 GNG3P63215 75 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 PAX2Q02962 417 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 MICBQ29980 383 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 ZNF684Q5T5D7 378 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 PLCXD3Q63HM9 321 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 KRT74Q7RTS7 529 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 ZNF418Q8TF45 676 aaPredicted RBP14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 RNFT2Q96EX2 444 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 ERVK-18Q9QC07 812 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 CTSZQ9UBR2 303 aa14.36□□□□□ -0.11
CHMP1A-208ENST00000550102 IGHV3OR15-7A0A075B7D8 119 aa14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 A0A0A6YYJ9 748 aa14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 DHRS7CA6NNS2 312 aa14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 ENSAO43768 121 aaKnown RBP14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 MPZL2O60487 215 aa14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 SRSF2Q01130 221 aaKnown RBP14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 CEACAM21Q3KPI0 293 aa14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 KRTAP24-1Q3LI83 254 aa14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 CEP78Q5JTW2 689 aa14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 ZNF841Q6ZN19 808 aa14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 PHC2Q8IXK0 858 aa14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 SCCPDHQ8NBX0 429 aa14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 OR10Z1Q8NGY1 313 aa14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 RAB40AQ8WXH6 277 aa14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 RPL3LQ92901 407 aaKnown RBP14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 PPP1R14AQ96A00 147 aa14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 DACT3Q96B18 629 aaPredicted RBP14.35□□□□□ -0.11
CHMP1A-208ENST00000550102 SLC29A1Q99808 456 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms