RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 KLHL30Q0D2K2 578 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 NPRL3Q12980 569 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 SNTB2Q13425 540 aaKnown RBP2.19□□□□□ -2.06
CNOT2-216ENST00000548939 HEPACAMQ14CZ8 416 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 SPHARQ15513 63 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 HFEQ30201 348 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 TMEM176BQ3YBM2 270 aaPredicted RBP2.19□□□□□ -2.06
CNOT2-216ENST00000548939 SEL1L2Q5TEA6 688 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 CAVIN1Q6NZI2 390 aaKnown RBP2.19□□□□□ -2.06
CNOT2-216ENST00000548939 CASP12Q6UXS9 341 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 ZNF571Q7Z3V5 609 aaPredicted RBP2.19□□□□□ -2.06
CNOT2-216ENST00000548939 MARCH3Q86UD3 253 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 THOC6Q86W42 341 aaKnown RBP2.19□□□□□ -2.06
CNOT2-216ENST00000548939 RPP25LQ8N5L8 163 aaKnown RBP2.19□□□□□ -2.06
CNOT2-216ENST00000548939 ZNF615Q8N8J6 731 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 FADS6Q8N9I5 356 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 OR7G1Q8NGA0 311 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 OR52R1Q8NGF1 315 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 ANKRD7Q92527 254 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 CCL17Q92583 94 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 SLC25A38Q96DW6 304 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 CCDC126Q96EE4 140 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 SH3YL1Q96HL8 342 aaPredicted RBP2.19□□□□□ -2.06
CNOT2-216ENST00000548939 GPR21Q99679 349 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 ANP32EQ9BTT0 268 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 ZNF717Q9BY31 904 aaPredicted RBP2.19□□□□□ -2.06
CNOT2-216ENST00000548939 MRPL37Q9BZE1 423 aaKnown RBP2.19□□□□□ -2.06
CNOT2-216ENST00000548939 TBL1XR1Q9BZK7 514 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 PPA2Q9H2U2 334 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 CXorf21Q9HAI6 301 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 PARVBQ9HBI1 364 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 TMEM165Q9HC07 324 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 CRLF2Q9HC73 371 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 CHRAC1Q9NRG0 131 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 MS4A12Q9NXJ0 267 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 EMC3Q9P0I2 261 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 PHF11Q9UIL8 331 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 SLC22A14Q9Y267 594 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 PLLPQ9Y342 182 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 INSIG2Q9Y5U4 225 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 USH1CQ9Y6N9 552 aa2.19□□□□□ -2.06
CNOT2-216ENST00000548939 PPIAL4EA0A075B759 164 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 PPIAL4CA0A0B4J2A2 164 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 IGHV1-69-2A0A0G2JMI3 117 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 GJE1A6NN92 205 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 PPIAL4DF5H284 164 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 MRPL33O75394 65 aaKnown RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 NME6O75414 186 aaPredicted RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 VAPBO95292 243 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 TTC4O95801 387 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 PTMAP06454 111 aaKnown RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 C8GP07360 202 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 IGFBP1P08833 259 aaPredicted RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 CECR9P0C854 216 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 C1GALT1C1LP0DN25 315 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 PPIAL4FP0DN26 164 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 UROSP10746 265 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 CPMP14384 443 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 GTF2E2P29084 291 aaKnown RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 TGFBR2P37173 567 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 MAGEA8P43361 318 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 RGS4P49798 205 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 XKP51811 444 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 EIF3EP60228 445 aaKnown RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 MRPS11P82912 194 aaKnown RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 UBXN1Q04323 297 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 EGFEM1PQ0D2K5 195 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 IFT88Q13099 833 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 DDX39BQ13838 428 aaKnown RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 TRIP13Q15645 432 aaPredicted RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 PARP6Q2NL67 630 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 GLYR1Q49A26 553 aaPredicted RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 CPTPQ5TA50 214 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 HIST2H2AA3Q6FI13 130 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 TRAT1Q6PIZ9 186 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 LRRN1Q6UXK5 716 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 CYHR1Q6ZMK1 362 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 CENPUQ71F23 418 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 TMEM179BQ7Z7N9 219 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 LINC00523Q86TU6 105 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 LRP11Q86VZ4 500 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 NDUFA11Q86Y39 141 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 SBSPONQ8IVN8 264 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 PDZD9Q8IXQ8 264 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 GTPBP8Q8N3Z3 284 aaPredicted RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 C17orf78Q8N4C9 275 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 GATSQ8NAP1 163 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 OR4C13Q8NGP0 309 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 EEF1AKMT1Q8WVE0 214 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 DNAJA3Q96EY1 480 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 SSX3Q99909 188 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 CITED2Q99967 270 aaPredicted RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 CENPKQ9BS16 269 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 GPR61Q9BZJ8 451 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 ZNF442Q9H7R0 627 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 EXD2Q9NVH0 621 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 MYEF2Q9P2K5 600 aaKnown RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 TRMT6Q9UJA5 497 aaKnown RBP2.18□□□□□ -2.06
CNOT2-216ENST00000548939 ZNF221Q9UK13 617 aa2.18□□□□□ -2.06
CNOT2-216ENST00000548939 HYOU1Q9Y4L1 999 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms