RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 SPERTQ8NA61 448 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 OR51A7Q8NH64 312 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 FAM81AQ8TBF8 368 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 DGCR14Q96DF8 476 aaKnown RBP11.11□□□□□ -0.63
CDX2-202ENST00000548877 Q96MT0 163 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 SLC22A4Q9H015 551 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 FN3KRPQ9HA64 309 aa11.11□□□□□ -0.63
CDX2-202ENST00000548877 AURKAIP1Q9NWT8 199 aaPredicted RBP11.11□□□□□ -0.63
CDX2-202ENST00000548877 RPUSD1Q9UJJ7 312 aaKnown RBP11.11□□□□□ -0.63
CDX2-202ENST00000548877 NOP16Q9Y3C1 178 aaKnown RBP11.11□□□□□ -0.63
CDX2-202ENST00000548877 OOEPA6NGQ2 149 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 XPNPEP2O43895 674 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 KHDRBS3O75525 346 aaKnown RBP11.1□□□□□ -0.63
CDX2-202ENST00000548877 GABRA5P31644 462 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 HOXA4Q00056 320 aaPredicted RBP11.1□□□□□ -0.63
CDX2-202ENST00000548877 GUCA2AQ02747 115 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 TSPAN31Q12999 210 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 GK2Q14410 553 aaPredicted RBP11.1□□□□□ -0.63
CDX2-202ENST00000548877 SEC23BQ15437 767 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 PRAMEF6Q5VXH4 476 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 VMO1Q7Z5L0 202 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 GPR141Q7Z602 305 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 OAFQ86UD1 273 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 SVOPQ8N4V2 548 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 GJC3Q8NFK1 279 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 RHOXF1Q8NHV9 184 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 Q96M85 177 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 PLCXD1Q9NUJ7 323 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 UFSP2Q9NUQ7 469 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 CLN6Q9NWW5 311 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 VSX1Q9NZR4 365 aaPredicted RBP11.1□□□□□ -0.63
CDX2-202ENST00000548877 GRHPRQ9UBQ7 328 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 ADAM18Q9Y3Q7 739 aa11.1□□□□□ -0.63
CDX2-202ENST00000548877 A0A087WUU8 490 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 SNTNA6NMZ2 147 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 H3BN98 237 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 XKRYO14609 159 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 DVL1O14640 695 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 GMDSO60547 372 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 LHBP01229 141 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 JUNBP17275 347 aaPredicted RBP11.09□□□□□ -0.63
CDX2-202ENST00000548877 SNRPGP62308 76 aaKnown RBP11.09□□□□□ -0.63
CDX2-202ENST00000548877 PTGES3Q15185 160 aaKnown RBP11.09□□□□□ -0.63
CDX2-202ENST00000548877 ZBED5Q49AG3 693 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 OXLD1Q5BKU9 147 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 SLX4IPQ5VYV7 408 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 TEX36Q5VZQ5 186 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 SFRP4Q6FHJ7 346 aaPredicted RBP11.09□□□□□ -0.63
CDX2-202ENST00000548877 RPL13AP3Q6NVV1 102 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 RASSF6Q6ZTQ3 369 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 TMPRSS11FQ6ZWK6 438 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 NRMQ8IXM6 262 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 BPIFB6Q8NFQ5 453 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 TEX47Q8TBZ9 253 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 MYDGFQ969H8 173 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 WDR76Q9H967 626 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 COA3Q9Y2R0 106 aaPredicted RBP11.09□□□□□ -0.63
CDX2-202ENST00000548877 LHFPL6Q9Y693 200 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 DNAH9Q9NYC9 4486 aa11.09□□□□□ -0.63
CDX2-202ENST00000548877 EFCAB9A8MZ26 197 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 ZNF701M0R085 212 aaPredicted RBP11.08□□□□□ -0.64
CDX2-202ENST00000548877 NPFFO15130 113 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 SLC16A7O60669 478 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 NOL3O60936 208 aaKnown RBP11.08□□□□□ -0.64
CDX2-202ENST00000548877 ACSM4P0C7M7 580 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 POU1F1P28069 291 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 GSSP48637 474 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 MEDAGQ5VYS4 303 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 OTPQ5XKR4 325 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 GPR139Q6DWJ6 353 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 PTCHD4Q6ZW05 846 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 SATL1Q86VE3 508 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 FAM90A1Q86YD7 464 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 PDZD9Q8IXQ8 264 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 ENTHD1Q8IYW4 607 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 GCSAMQ8N6F7 178 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 OR8J1Q8NGP2 316 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 OR13C2Q8NGS9 318 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 CNIH3Q8TBE1 160 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 SYT4Q9H2B2 425 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 DUSP21Q9H596 190 aa11.08□□□□□ -0.64
CDX2-202ENST00000548877 RANBP3Q9H6Z4 567 aaPredicted RBP11.08□□□□□ -0.64
CDX2-202ENST00000548877 EFCAB10A6NFE3 127 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 ANKRD61A6NGH8 418 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 RGS10O43665 173 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 GYPAP02724 150 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 EPHA2P29317 976 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 SDHAP31040 664 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 OMPP47874 163 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 SLC35A2P78381 396 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 ECH1Q13011 328 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 OR8G1Q15617 311 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 OR8B8Q15620 311 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 C12orf73Q69YU5 71 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 CRIP3Q6Q6R5 217 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 C1orf122Q6ZSJ8 110 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 KCTD8Q6ZWB6 473 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 PRSS48Q7RTY5 328 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 DTX3Q8N9I9 347 aa11.07□□□□□ -0.64
CDX2-202ENST00000548877 BEND2Q8NDZ0 799 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms