RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 OR51T1Q8NGJ9 327 aa8.71□□□□□ -1.02
SMARCD1-205ENST00000548573 OR14K1Q8NGZ2 314 aa8.71□□□□□ -1.02
SMARCD1-205ENST00000548573 LILRB1Q8NHL6 650 aaPredicted RBP8.71□□□□□ -1.02
SMARCD1-205ENST00000548573 LYPD6BQ8NI32 183 aa8.71□□□□□ -1.02
SMARCD1-205ENST00000548573 FAM71F1Q96KD3 344 aaPredicted RBP8.71□□□□□ -1.02
SMARCD1-205ENST00000548573 ST6GALNAC5Q9BVH7 336 aa8.71□□□□□ -1.02
SMARCD1-205ENST00000548573 NKX2-4Q9H2Z4 354 aa8.71□□□□□ -1.02
SMARCD1-205ENST00000548573 GSKIPQ9P0R6 139 aa8.71□□□□□ -1.02
SMARCD1-205ENST00000548573 ATXN7L1Q9ULK2 861 aaPredicted RBP8.71□□□□□ -1.02
SMARCD1-205ENST00000548573 C14orf166Q9Y224 244 aaKnown RBP8.71□□□□□ -1.02
SMARCD1-205ENST00000548573 PCDHGA1Q9Y5H4 931 aa8.71□□□□□ -1.02
SMARCD1-205ENST00000548573 IGKV1-9A0A0C4DH69 117 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 SHISA7A6NL88 538 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 SDCBPO00560 298 aaPredicted RBP8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 EFNA2O43921 213 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 HTR3BO95264 441 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 IFNA2P01563 188 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 SERPINA5P05154 406 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 HOXB5P09067 269 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 SLC2A1P11166 492 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 NAT2P11245 290 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 FOLR1P15328 257 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 ZNF708P17019 499 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 NME2P22392 152 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 CTSSP25774 331 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 RAB5BP61020 215 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 GRB2P62993 217 aaKnown RBP8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 ECH1Q13011 328 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 MYBPHQ13203 477 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 HMGN3Q15651 99 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 C16orf47Q6ZP98 133 aaPredicted RBP8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 PLXDC1Q8IUK5 500 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 APCDD1LQ8NCL9 501 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 CPNE2Q96FN4 548 aaPredicted RBP8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 SULT4A1Q9BR01 284 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 TM2D1Q9BX74 207 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 DUSP15Q9H1R2 295 aaPredicted RBP8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 SDHAF3Q9NRP4 125 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 SLC22A11Q9NSA0 550 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 SEMA5BQ9P283 1151 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 TUBD1Q9UJT1 453 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 KPTNQ9Y664 436 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 PCDH15Q96QU1 1955 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 XIRP2A4UGR9 3374 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 PHF3Q92576 2039 aaKnown RBP8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 EXPH5Q8NEV8 1989 aa8.7□□□□□ -1.02
SMARCD1-205ENST00000548573 IGHV1OR21-1A0A087WYE8 117 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 K7EPK0 472 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 RRP8O43159 456 aaKnown RBP8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 TRAF3IP2O43734 574 aaPredicted RBP8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 IGLV3-1P01715 115 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 SFTPBP07988 381 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 CD27P26842 260 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 RPL12P30050 165 aaKnown RBP8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 CD80P33681 288 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 RBMXP38159 391 aaKnown RBP8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 PTGFRP43088 359 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 ZNF41P51814 821 aaPredicted RBP8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 FAM3AP98173 230 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 MFAP5Q13361 173 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 RBM39Q14498 530 aaKnown RBP8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 KISS1Q15726 138 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 CHRFAM7AQ494W8 412 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 OPN5Q6U736 354 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 FAM71E2Q8N5Q1 922 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 KDF1Q8NAX2 398 aaPredicted RBP8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 OR6X1Q8NH79 312 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 C2CD4CQ8TF44 421 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 KIRREL1Q96J84 757 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 PECRQ9BY49 303 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 TGIF2Q9GZN2 237 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 CACFD1Q9UGQ2 172 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 TIMM10BQ9Y5J6 103 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 IGLV3-32A0A0A0MS00 114 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 IGHV3-20A0A0C4DH32 117 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 RER1O15258 196 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 DEDDO75618 318 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 HPNP05981 417 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 RCC1P18754 421 aaPredicted RBP8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 BLVRBP30043 206 aaPredicted RBP8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 CDAP32320 146 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 PTGER4P35408 488 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 THBS4P35443 961 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 OR1D5P58170 312 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 HNRNPKP61978 463 aaKnown RBP eCLIP8.69□□□□□ -1.023e-8■■■■□ 21.7
SMARCD1-205ENST00000548573 SPEM2Q0P670 501 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 SMCO1Q147U7 214 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 SHHQ15465 462 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 ZNF239Q16600 458 aaKnown RBP8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 HIST3H3Q16695 136 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 IAH1Q2TAA2 248 aaPredicted RBP8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 PLPPR5Q32ZL2 321 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 RNF212Q495C1 297 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 CRIP3Q6Q6R5 217 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 DHRS11Q6UWP2 260 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 Q6ZS52 159 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 FAM57BQ71RH2 274 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 SLC16A14Q7RTX9 510 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 COMMD1Q8N668 190 aa8.69□□□□□ -1.02
SMARCD1-205ENST00000548573 ZNF283Q8N7M2 679 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms