RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SMARCD3Q6STE5 483 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 VMO1Q7Z5L0 202 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 CYP4Z1Q86W10 505 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 LNX2Q8N448 690 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 GCSAMQ8N6F7 178 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 ZSCAN4Q8NAM6 433 aaPredicted RBP13.56□□□□□ -0.24
SSH1-208ENST00000548522 OR52J3Q8NH60 311 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 GIPC3Q8TF64 312 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 ST8SIA4Q92187 359 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 APOL4Q9BPW4 351 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 FUZQ9BT04 418 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 DNAJB11Q9UBS4 358 aa13.56□□□□□ -0.24
SSH1-208ENST00000548522 FAM32AQ9Y421 112 aaKnown RBP13.56□□□□□ -0.24
SSH1-208ENST00000548522 KMT2CQ8NEZ4 4911 aaKnown RBP13.56□□□□□ -0.24
SSH1-208ENST00000548522 OR6C68A6NDL8 312 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 M0R135 149 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 TNFRSF11BO00300 401 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 GRPP07492 148 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 RRM2P31350 389 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 ISL1P61371 349 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 ESRRGP62508 458 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 KCNJ8Q15842 424 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 LYPD4Q6UWN0 246 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 LINC00471Q8N535 108 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 SDR9C7Q8NEX9 313 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 ZNF799Q96GE5 643 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 VCX3AQ9NNX9 186 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 KRT84Q9NSB2 600 aa13.55□□□□□ -0.24
SSH1-208ENST00000548522 RPUSD1Q9UJJ7 312 aaKnown RBP13.55□□□□□ -0.24
SSH1-208ENST00000548522 TRAV38-1A0A0B4J264 116 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 hCG_1807616A0A1W2PRN6 198 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 A6NLC8 198 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 G3V4G9 280 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 HLA-DQA2P01906 255 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 SLC2A1P11166 492 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 CRHBPP24387 322 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 EGR3Q06889 387 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 ECH1Q13011 328 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 MICAQ29983 383 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 C6orf141Q5SZD1 244 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 WDR86Q86TI4 376 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 ZBTB46Q86UZ6 589 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 SATL1Q86VE3 508 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 HS3ST5Q8IZT8 346 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 OR56B2PQ8NGI1 322 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 OR2AJ1Q8NGZ0 328 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 ZNRF4Q8WWF5 429 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 SEH1LQ96EE3 360 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 HRASLS5Q96KN8 279 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 OR52D1Q9H346 318 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 SIRT7Q9NRC8 400 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 PTTG2Q9NZH5 202 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 ONECUT1Q9UBC0 465 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 NBEAL2Q6ZNJ1 2754 aa13.54□□□□□ -0.24
SSH1-208ENST00000548522 A0A1W2PRD5 423 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 A0A1W2PRF3 423 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 A0A1W2PRM7 423 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 GGT3PA6NGU5 568 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 RENP00797 406 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 PRB2P02812 416 aaPredicted RBP13.53□□□□□ -0.24
SSH1-208ENST00000548522 ATP6V1B1P15313 513 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 PYCR1P32322 319 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 TPTEP56180 551 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 KLRD1Q13241 179 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 CNPY1Q3B7I2 92 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 ZIK1Q3SY52 487 aaPredicted RBP13.53□□□□□ -0.24
SSH1-208ENST00000548522 CDONQ4KMG0 1287 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 DHRS7BQ6IAN0 325 aaPredicted RBP13.53□□□□□ -0.24
SSH1-208ENST00000548522 GDPGP1Q6ZNW5 385 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 PNKDQ8N490 385 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 FAM216BQ8N7L0 139 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 OR10G2Q8NGC3 310 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 TSC22D3Q99576 134 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 CCL13Q99616 98 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 SLC22A4Q9H015 551 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 C16orf95Q9H693 158 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 ZNRD1Q9P1U0 126 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 VPREB3Q9UKI3 123 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 U3KQV3 271 aa13.53□□□□□ -0.24
SSH1-208ENST00000548522 ZNF816-ZNF321PA0A0X1KG74 233 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 TVP23AA6NH52 213 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.52□□□□□ -0.25
SSH1-208ENST00000548522 ARPC3O15145 178 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 GMDSO60547 372 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 LHBP01229 141 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 SELLP14151 372 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 PRKACGP22612 351 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 SLC6A6P31641 620 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 SPIBQ01892 262 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 PCK2Q16822 640 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 C2orf68Q2NKX9 166 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 WDR38Q5JTN6 314 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 SLC35F1Q5T1Q4 408 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 TEX36Q5VZQ5 186 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 IFT27Q9BW83 186 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 DPAGT1Q9H3H5 408 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 PPP1R3EQ9H7J1 279 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 CNTD2Q9H8S5 307 aa13.52□□□□□ -0.25
SSH1-208ENST00000548522 PAPOLBQ9NRJ5 636 aaKnown RBP13.52□□□□□ -0.25
SSH1-208ENST00000548522 MRPL15Q9P015 296 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms