RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 TCN2P20062 427 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 TAS2R31P59538 309 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 RFPL4BQ6ZWI9 263 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 GGNQ86UU5 652 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 CCDC54Q8NEL0 328 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 CASTOR1Q8WTX7 329 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 PPP1R1CQ8WVI7 109 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 C10orf35Q96D05 121 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 CXorf58Q96LI9 332 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 REG4Q9BYZ8 158 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 NARFLQ9H6Q4 476 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.6□□□□□ -0.23
BRF1-212ENST00000547562 TECTAO75443 2155 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 POM121CA8CG34 1229 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 FOXI3A8MTJ6 420 aaPredicted RBP13.6□□□□□ -0.23
BRF1-212ENST00000547562 SPDEFO95238 335 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 FCGR2AP12318 317 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 MGMTP16455 207 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 AVPR2P30518 371 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 CBX5P45973 191 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 CARD18P57730 90 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 ARFRP1Q13795 201 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 GPR137CQ8N3F9 429 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 HAS2Q92819 552 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 SDHAF2Q9NX18 166 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 TNFSF18Q9UNG2 199 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 PCDHGA1Q9Y5H4 931 aa13.6□□□□□ -0.23
BRF1-212ENST00000547562 HPP00738 406 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 NTF4P34130 210 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 ZNF345Q14585 488 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 SNAI3Q3KNW1 292 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 LRRC37A5PQ49AS3 106 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 SLC16A14Q7RTX9 510 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 OR52H1Q8NGJ2 320 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 LOXL2Q9Y4K0 774 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 WDFY4Q6ZS81 3184 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 MFSD2BA6NFX1 497 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 LRRC3CA6NJW4 275 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 CEACAM18A8MTB9 384 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 FAM25EA8MYX2 175 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 SGCEO43556 437 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 RFPL3SP0C7P2 107 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 SERPINA2P20848 420 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 CRYGSP22914 178 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 ATP1B3P54709 279 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 RAB35Q15286 201 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 LPAL2Q16609 132 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 ACER2Q5QJU3 275 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 SIGIRRQ6IA17 410 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 H3F3CQ6NXT2 135 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 C6orf15Q6UXA7 325 aaPredicted RBP13.59□□□□□ -0.23
BRF1-212ENST00000547562 KCNRGQ8N5I3 272 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 OR5M9Q8NGP3 310 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 OR10K1Q8NGX5 313 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 SUN5Q8TC36 379 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 CT55Q8WUE5 264 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 CRLF2Q9HC73 371 aa13.59□□□□□ -0.23
BRF1-212ENST00000547562 CCDC187A0A096LP49 1063 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 DBX1A6NMT0 343 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 ZNF716A6NP11 495 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 OR2F2O95006 317 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 RLN2P04090 185 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 OR2F1Q13607 317 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 SSPNQ14714 243 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 RSPO4Q2I0M5 234 aaPredicted RBP13.58□□□□□ -0.24
BRF1-212ENST00000547562 TMEM128Q5BJH2 165 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 DRAM2Q6UX65 266 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 KCTD9Q7L273 389 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 TIPARPQ7Z3E1 657 aaKnown RBP13.58□□□□□ -0.24
BRF1-212ENST00000547562 ESX1Q8N693 406 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 OR5H2Q8NGV7 314 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 PIGTQ969N2 578 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 SGK3Q96BR1 496 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 S100A13Q99584 98 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 TM2D1Q9BX74 207 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 NUP50Q9UKX7 468 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 GPR132Q9UNW8 380 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 PCSK5Q92824 1860 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 SYNGR3O43761 229 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 CST2P09228 141 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 AMY2BP19961 511 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 BLVRBP30043 206 aaPredicted RBP13.58□□□□□ -0.24
BRF1-212ENST00000547562 UBA52P62987 128 aaKnown RBP13.58□□□□□ -0.24
BRF1-212ENST00000547562 SIGLEC14Q08ET2 396 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 JMJD6Q6NYC1 403 aaPredicted RBP13.58□□□□□ -0.24
BRF1-212ENST00000547562 SLC39A7Q92504 469 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 C5orf66Q9H5L9 145 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 TMEM38BQ9NVV0 291 aa13.58□□□□□ -0.24
BRF1-212ENST00000547562 ZSCAN5BA6NJL1 495 aa13.57□□□□□ -0.24
BRF1-212ENST00000547562 CXCL13O43927 109 aa13.57□□□□□ -0.24
BRF1-212ENST00000547562 HPNP05981 417 aa13.57□□□□□ -0.24
BRF1-212ENST00000547562 NPY4RP50391 375 aa13.57□□□□□ -0.24
BRF1-212ENST00000547562 TCEAL6Q6IPX3 200 aa13.57□□□□□ -0.24
BRF1-212ENST00000547562 TMEM185AQ8NFB2 350 aa13.57□□□□□ -0.24
BRF1-212ENST00000547562 SEMA6DQ8NFY4 1073 aa13.57□□□□□ -0.24
BRF1-212ENST00000547562 CPT1CQ8TCG5 803 aa13.57□□□□□ -0.24
BRF1-212ENST00000547562 RHBDD1Q8TEB9 315 aa13.57□□□□□ -0.24
BRF1-212ENST00000547562 ROBO4Q8WZ75 1007 aa13.57□□□□□ -0.24
BRF1-212ENST00000547562 ST8SIA2Q92186 375 aa13.57□□□□□ -0.24
BRF1-212ENST00000547562 TCEAL3Q969E4 200 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms