RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 HIST1H2AAQ96QV6 131 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 ZNF184Q99676 751 aaPredicted RBP12.2□□□□□ -0.46
DDX54-203ENST00000546869 MICU1Q9BPX6 476 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 FN3KRPQ9HA64 309 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 SCN3BQ9NY72 215 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 WIPI2Q9Y4P8 454 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 CELSR1Q9NYQ6 3014 aa12.2□□□□□ -0.46
DDX54-203ENST00000546869 ZNF469Q96JG9 3925 aaPredicted RBP12.2□□□□□ -0.46
DDX54-203ENST00000546869 TMEM212A6NML5 194 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 SLC1A7O00341 560 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 SMAD7O15105 426 aaKnown RBP12.19□□□□□ -0.46
DDX54-203ENST00000546869 DENRO43583 198 aaKnown RBP12.19□□□□□ -0.46
DDX54-203ENST00000546869 IGHV2-70P01814 119 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 MVKQ03426 396 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 TMEM249Q2WGJ8 235 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 TMEM155Q4W5P6 130 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 CLVS2Q5SYC1 327 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 RPL22L1Q6P5R6 122 aaKnown RBP12.19□□□□□ -0.46
DDX54-203ENST00000546869 MOGAT3Q86VF5 341 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 LRRC28Q86X40 367 aaPredicted RBP12.19□□□□□ -0.46
DDX54-203ENST00000546869 C11orf53Q8IXP5 236 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 STX19Q8N4C7 294 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 OR1M1Q8NGA1 313 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 OR11L1Q8NGX0 322 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 RPS4Y2Q8TD47 263 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 MYDGFQ969H8 173 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 RTL8AQ9BWD3 113 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 CDCA4Q9BXL8 241 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 DUSP21Q9H596 190 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 TPRKBQ9Y3C4 175 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 PCDHGB5Q9Y5G0 923 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 ACANP16112 2415 aa12.19□□□□□ -0.46
DDX54-203ENST00000546869 LOC107986453A0A1B0GWG9 222 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 E9PI62 339 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 OGG1O15527 345 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 NRASP01111 189 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 LHBP01229 141 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 CDK1P06493 297 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 FAHP16930 419 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 C21orf33P30042 268 aaPredicted RBP12.18□□□□□ -0.46
DDX54-203ENST00000546869 GZMKP49863 264 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 LMO4P61968 165 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 BTG1P62324 171 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 SLC35A2P78381 396 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 MPPED2Q15777 294 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 PRAMEF6Q5VXH4 476 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 AHSA2Q719I0 299 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 WDR86Q86TI4 376 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 MUC20Q8N307 709 aaPredicted RBP12.18□□□□□ -0.46
DDX54-203ENST00000546869 NANOGP1Q8N7R0 232 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 ZNF420Q8TAQ5 688 aaPredicted RBP12.18□□□□□ -0.46
DDX54-203ENST00000546869 HPSE2Q8WWQ2 592 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 PP6455Q8WZ26 134 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 DVL3Q92997 716 aaPredicted RBP12.18□□□□□ -0.46
DDX54-203ENST00000546869 TECTBQ96PL2 329 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 Q9H521 79 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 PPP1R3EQ9H7J1 279 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 TREM2Q9NZC2 230 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 RNF7Q9UBF6 113 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 CLEC2DQ9UHP7 191 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 HHLA2Q9UM44 414 aa12.18□□□□□ -0.46
DDX54-203ENST00000546869 OR5B21A6NL26 309 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 CD5LO43866 347 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 ZFPL1O95159 310 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 HEXAP06865 529 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 IRF2P14316 349 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 THBS2P35442 1172 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 MDH2P40926 338 aaKnown RBP12.17□□□□□ -0.46
DDX54-203ENST00000546869 GNG3P63215 75 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 KRTAP1-1Q07627 177 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 ZNF154Q13106 437 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 ODF4Q2M2E3 257 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 OR2G6Q5TZ20 316 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 CYB5R2Q6BCY4 276 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 RDH10Q8IZV5 341 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 ZNF676Q8N7Q3 588 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 MAPK1IP1LQ8NDC0 245 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 OR10Z1Q8NGY1 313 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 OR5AK2Q8NH90 309 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 CLDND2Q8NHS1 167 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 RNF170Q96K19 258 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 CHST5Q9GZS9 411 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 COMMD4Q9H0A8 199 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 TMEM165Q9HC07 324 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 TRIM36Q9NQ86 728 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 DCAF16Q9NXF7 216 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 ERGIC3Q9Y282 383 aa12.17□□□□□ -0.46
DDX54-203ENST00000546869 PPIAL4EA0A075B759 164 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 TRBV2A0A0J9YWF9 115 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 LRP5LA4QPB2 252 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 ANKRD61A6NGH8 418 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 PTGES3LE9PB15 166 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 PPIAL4DF5H284 164 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 WNT9BO14905 357 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 LY6G6DO95868 133 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 SERPINA3P01011 423 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 CD1AP06126 327 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 GRPP07492 148 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 PPIAL4FP0DN26 164 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 IGHV4-31P0DP07 118 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms