RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 CLPPQ16740 277 aaPredicted RBP11.21□□□□□ -0.61
COL4A6-209ENST00000545689 HLA-BQ31612 363 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 ZFP62Q8NB50 900 aaPredicted RBP11.21□□□□□ -0.61
COL4A6-209ENST00000545689 SCCPDHQ8NBX0 429 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 ZNF331Q9NQX6 463 aaPredicted RBP11.21□□□□□ -0.61
COL4A6-209ENST00000545689 LY75O60449 1722 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 EFSO43281 561 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 NDUFB7P17568 137 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 NOVA1P51513 510 aaKnown RBP11.21□□□□□ -0.61
COL4A6-209ENST00000545689 TRAT1Q6PIZ9 186 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 RELL2Q8NC24 303 aaPredicted RBP11.21□□□□□ -0.61
COL4A6-209ENST00000545689 CRISPLD2Q9H0B8 497 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 MMP26Q9NRE1 261 aa11.21□□□□□ -0.61
COL4A6-209ENST00000545689 MRPS18AQ9NVS2 196 aaKnown RBP11.21□□□□□ -0.61
COL4A6-209ENST00000545689 A0A096LPE4 126 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 A0A1W2PPZ6 126 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 C5orf67F2Z3F1 127 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 ZIC2O95409 532 aaPredicted RBP11.21□□□□□ -0.62
COL4A6-209ENST00000545689 HOXD11P31277 338 aaPredicted RBP11.21□□□□□ -0.62
COL4A6-209ENST00000545689 NXPH1P58417 271 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 BPIFB3P59826 476 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 UBE2G1P62253 170 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 PLA1AQ53H76 456 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 ZNF561Q8N587 486 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 GPR119Q8TDV5 335 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 EXTL1Q92935 676 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 LHX4Q969G2 390 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 C10orf35Q96D05 121 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 RYDENQ9NUL5 291 aaKnown RBP11.21□□□□□ -0.62
COL4A6-209ENST00000545689 PRKNO60260 465 aaPredicted RBP11.21□□□□□ -0.62
COL4A6-209ENST00000545689 CDAP32320 146 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 CDKN2AP42771 156 aaKnown RBP11.21□□□□□ -0.62
COL4A6-209ENST00000545689 BAMBIQ13145 260 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 HABP2Q14520 560 aaPredicted RBP11.21□□□□□ -0.62
COL4A6-209ENST00000545689 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.21□□□□□ -0.62
COL4A6-209ENST00000545689 OR51I2Q9H344 312 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 PCOLCE2Q9UKZ9 415 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 ICAM5Q9UMF0 924 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 OSGIN2Q9Y236 505 aa11.21□□□□□ -0.62
COL4A6-209ENST00000545689 TMEM30CPA0ZSE6 113 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 ZNF727A8MUV8 499 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 RPA2P15927 270 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 JMJD6Q6NYC1 403 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-209ENST00000545689 OR4D9Q8NGE8 314 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 GALMQ96C23 342 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 PRRX2Q99811 253 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 HIF1ANQ9NWT6 349 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 CROCCQ5TZA2 2017 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 IGHV5-51A0A0C4DH38 117 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 PI3P19957 117 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 HAGHQ16775 308 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 OR52N4Q8NGI2 321 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 TVP23CQ96ET8 276 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 CHRDL1Q9BU40 450 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 CFHR5Q9BXR6 569 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 MTCH1Q9NZJ7 389 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 V9GYH0 126 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 RAB27BO00194 218 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 DEFA4P12838 97 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 KISS1Q15726 138 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 ADAM5Q6NVV9 412 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 ROBO4Q8WZ75 1007 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 FN3KRPQ9HA64 309 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 CDC42EP2O14613 210 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 ST8SIA5O15466 376 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 SULT1A3P0DMM9 295 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 SULT1A4P0DMN0 295 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 SLC6A1P30531 599 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 PTGFRP43088 359 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 SSTP61278 116 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 GNG3P63215 75 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 DMWDQ09019 674 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 SURF2Q15527 256 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-209ENST00000545689 THSD4Q6ZMP0 1018 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 Q6ZS52 159 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 C20orf24Q9BUV8 137 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 OCIAD1Q9NX40 245 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 SCN1AP35498 2009 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 CLN5O75503 358 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 HEXAP06865 529 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 RRASP10301 218 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 ERHP84090 104 aaKnown RBP11.2□□□□□ -0.62
COL4A6-209ENST00000545689 IGFBP7Q16270 282 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 THNSL2Q86YJ6 484 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 ASB10Q8WXI3 467 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 RHOFQ9HBH0 211 aa11.2□□□□□ -0.62
COL4A6-209ENST00000545689 COL9A1P20849 921 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 YBX1P67809 324 aaKnown RBP11.19□□□□□ -0.62
COL4A6-209ENST00000545689 UBE3DQ7Z6J8 389 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 OR4F5Q8NH21 305 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 OR6X1Q8NH79 312 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 SLC39A7Q92504 469 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 OR4F4Q96R69 305 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 IGHV1OR15-9A0A0B4J2B8 117 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 FFAR1O14842 300 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 GALR2O43603 387 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-209ENST00000545689 SPRY1O43609 319 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-209ENST00000545689 CDC14BO60729 498 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 RAB13P51153 203 aa11.19□□□□□ -0.62
COL4A6-209ENST00000545689 ATG4DQ86TL0 474 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms