RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 DEGS2Q6QHC5 323 aa16.46■□□□□ 0.23
CHD4-213ENST00000545584 OR8B12Q8NGG6 310 aa16.46■□□□□ 0.23
CHD4-213ENST00000545584 OR10Z1Q8NGY1 313 aa16.46■□□□□ 0.23
CHD4-213ENST00000545584 FAM81AQ8TBF8 368 aa16.46■□□□□ 0.23
CHD4-213ENST00000545584 SLC7A6OSQ96CW6 309 aaPredicted RBP16.46■□□□□ 0.23
CHD4-213ENST00000545584 RNF170Q96K19 258 aa16.46■□□□□ 0.23
CHD4-213ENST00000545584 FAM71F1Q96KD3 344 aaPredicted RBP16.46■□□□□ 0.23
CHD4-213ENST00000545584 MROQ9BYG7 248 aa16.46■□□□□ 0.23
CHD4-213ENST00000545584 PRRG3Q9BZD7 231 aa16.46■□□□□ 0.23
CHD4-213ENST00000545584 TLNRD1Q9H1K6 362 aa16.46■□□□□ 0.23
CHD4-213ENST00000545584 PRDM13Q9H4Q3 707 aa16.46■□□□□ 0.23
CHD4-213ENST00000545584 PPP1R3EQ9H7J1 279 aa16.46■□□□□ 0.23
CHD4-213ENST00000545584 CNTD2Q9H8S5 307 aa16.46■□□□□ 0.23
CHD4-213ENST00000545584 DNAJB11Q9UBS4 358 aa16.46■□□□□ 0.23
CHD4-213ENST00000545584 ACOD1A6NK06 481 aa16.45■□□□□ 0.22
CHD4-213ENST00000545584 POM121CA8CG34 1229 aa16.45■□□□□ 0.22
CHD4-213ENST00000545584 CRYBA1P05813 215 aa16.45■□□□□ 0.22
CHD4-213ENST00000545584 ACKR3P25106 362 aa16.45■□□□□ 0.22
CHD4-213ENST00000545584 ZDHHC23Q8IYP9 409 aa16.45■□□□□ 0.22
CHD4-213ENST00000545584 OR5P3Q8WZ94 311 aa16.45■□□□□ 0.22
CHD4-213ENST00000545584 ITFG2Q969R8 447 aa16.45■□□□□ 0.22
CHD4-213ENST00000545584 TEAD3Q99594 435 aa16.45■□□□□ 0.22
CHD4-213ENST00000545584 PKP2Q99959 881 aa16.45■□□□□ 0.22
CHD4-213ENST00000545584 SIRPDQ9H106 197 aa16.45■□□□□ 0.22
CHD4-213ENST00000545584 UNKLQ9H9P5 680 aaKnown RBP16.45■□□□□ 0.22
CHD4-213ENST00000545584 RPUSD1Q9UJJ7 312 aaKnown RBP16.45■□□□□ 0.22
CHD4-213ENST00000545584 TMEM14AQ9Y6G1 99 aa16.45■□□□□ 0.22
CHD4-213ENST00000545584 CENPVL3A0A0U1RRI6 287 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 TMEM269A0A1B0GVZ9 245 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 GPR37O15354 613 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 MAP2K3P46734 347 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 HCCSP53701 268 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 GMFBP60983 142 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 LRRC10Q5BKY1 277 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 Q6YL49 198 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 COMMD2Q86X83 199 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 OR5K1Q8NHB7 308 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 RPL3LQ92901 407 aaKnown RBP16.44■□□□□ 0.22
CHD4-213ENST00000545584 LHX4Q969G2 390 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 LYZL4Q96KX0 146 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 TNFRSF19Q9NS68 423 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 ACOXLQ9NUZ1 547 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 HAO2Q9NYQ3 351 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 KPTNQ9Y664 436 aa16.44■□□□□ 0.22
CHD4-213ENST00000545584 IGHV1-69DA0A0B4J2H0 117 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 NKX6-3A6NJ46 265 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.43■□□□□ 0.22
CHD4-213ENST00000545584 ZNF254O75437 659 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 IGHV1-69P01742 117 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 MRPL3P09001 348 aaKnown RBP16.43■□□□□ 0.22
CHD4-213ENST00000545584 ESRRGP62508 458 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 PTGES3Q15185 160 aaKnown RBP16.43■□□□□ 0.22
CHD4-213ENST00000545584 CDONQ4KMG0 1287 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 FAHD1Q6P587 224 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 THAP5Q7Z6K1 395 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 CMTM4Q8IZR5 234 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 TMEM86BQ8N661 226 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 FAM216BQ8N7L0 139 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 SCCPDHQ8NBX0 429 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 ASB17Q8WXJ9 295 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 TMIGD2Q96BF3 282 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 SEH1LQ96EE3 360 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 DMRTB1Q96MA1 342 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 DNTTIP1Q9H147 329 aa16.43■□□□□ 0.22
CHD4-213ENST00000545584 H2AFY2Q9P0M6 372 aaPredicted RBP16.43■□□□□ 0.22
CHD4-213ENST00000545584 A0A0U1RQV5 110 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 ZNF816-ZNF321PA0A0X1KG74 233 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 A0A1B0GVI7 797 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 PSMD9O00233 223 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 GSC2O15499 205 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 FCN3O75636 299 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 ATP6V1B1P15313 513 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 DCTDP32321 178 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 DAPP51397 102 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 RIDAP52758 137 aaKnown RBP16.42■□□□□ 0.22
CHD4-213ENST00000545584 IKZF1Q13422 519 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 ZNF829Q3KNS6 432 aaPredicted RBP16.42■□□□□ 0.22
CHD4-213ENST00000545584 FAM76BQ5HYJ3 339 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 ATPAF1Q5TC12 328 aaPredicted RBP16.42■□□□□ 0.22
CHD4-213ENST00000545584 STUMQ69YW2 141 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 OR5T2Q8NGG2 359 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 TBC1D15Q8TC07 691 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 ONECUT1Q9UBC0 465 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 IKZF2Q9UKS7 526 aa16.42■□□□□ 0.22
CHD4-213ENST00000545584 A0A1B0GW55 424 aa16.41■□□□□ 0.22
CHD4-213ENST00000545584 CCDC182A6NF36 153 aa16.41■□□□□ 0.22
CHD4-213ENST00000545584 AKR7A2O43488 359 aa16.41■□□□□ 0.22
CHD4-213ENST00000545584 MELTFP08582 738 aa16.41■□□□□ 0.22
CHD4-213ENST00000545584 DUX4L2P0CJ85 424 aa16.41■□□□□ 0.22
CHD4-213ENST00000545584 DUX4L3P0CJ86 424 aa16.41■□□□□ 0.22
CHD4-213ENST00000545584 DUX4L4P0CJ87 422 aa16.41■□□□□ 0.22
CHD4-213ENST00000545584 DUX4L5P0CJ88 424 aa16.41■□□□□ 0.22
CHD4-213ENST00000545584 DUX4L6P0CJ89 424 aa16.41■□□□□ 0.22
CHD4-213ENST00000545584 DUX4L7P0CJ90 424 aa16.41■□□□□ 0.22
CHD4-213ENST00000545584 TGM4P49221 684 aa16.41■□□□□ 0.22
CHD4-213ENST00000545584 RASSF2P50749 326 aa16.41■□□□□ 0.22
CHD4-213ENST00000545584 GNG3P63215 75 aa16.41■□□□□ 0.22
CHD4-213ENST00000545584 ELF3P78545 371 aaPredicted RBP16.41■□□□□ 0.22
CHD4-213ENST00000545584 DUX4L9Q6RFH8 374 aaPredicted RBP16.41■□□□□ 0.22
CHD4-213ENST00000545584 FIP1L1Q6UN15 594 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms