RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PPP1R3EQ9H7J1 279 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 MMP26Q9NRE1 261 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 CLN8Q9UBY8 286 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 OR52A1Q9UKL2 312 aa13.15□□□□□ -0.3
CCDC78-216ENST00000544996 METTL15A6NJ78 407 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 TRAPPC2LH3BP13 241 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 CDIPTO14735 213 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 ENTPD6O75354 484 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 SRSF10O75494 262 aaKnown RBP13.14□□□□□ -0.31
CCDC78-216ENST00000544996 SULT1C4O75897 302 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 AVPP01185 164 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 LHBP01229 141 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 TTRP02766 147 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 CD80P33681 288 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 ZSCAN26Q16670 478 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 BTNL3Q6UXE8 466 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 C1orf229Q6ZS94 237 aaPredicted RBP13.14□□□□□ -0.31
CCDC78-216ENST00000544996 SSX6Q7RTT6 188 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 FAM220AQ7Z4H9 259 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 C11orf53Q8IXP5 236 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 GCSAMQ8N6F7 178 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 LRRC29Q8WV35 223 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 PPP1R14AQ96A00 147 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 Q96MT0 163 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 SLC29A1Q99808 456 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 MRI1Q9BV20 369 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 OCEL1Q9H607 264 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 ERVK-18Q9QC07 812 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 ENPP5Q9UJA9 477 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 PIGLQ9Y2B2 252 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 INSIG2Q9Y5U4 225 aa13.14□□□□□ -0.31
CCDC78-216ENST00000544996 RNF212BA8MTL3 300 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 E9PQ18 207 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 TCF21O43680 179 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 DHRS3O75911 302 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 IGLV3-1P01715 115 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 MUC1P15941 1255 aaPredicted RBP13.13□□□□□ -0.31
CCDC78-216ENST00000544996 ZNF12P17014 697 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 CFHR2P36980 270 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 PSMB10P40306 273 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 NPY4RP50391 375 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 CSNK2BP67870 215 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 ACTC1P68032 377 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 ACTA1P68133 377 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 MICBQ29980 383 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 CEACAM21Q3KPI0 293 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 LYPD2Q6UXB3 125 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 WDR82Q6UXN9 313 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 KRT74Q7RTS7 529 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 C1QL2Q7Z5L3 287 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 RNFT2Q96EX2 444 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 TLNRD1Q9H1K6 362 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 PCDHGB1Q9Y5G3 927 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 AUP1Q9Y679 476 aa13.13□□□□□ -0.31
CCDC78-216ENST00000544996 LOC100130705A0A1B0GUX0 176 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 DAPL1A0PJW8 107 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 ADAM20O43506 726 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 FAHP16930 419 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 ADRA2CP18825 462 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 GPM6AP51674 278 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 GNG3P63215 75 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 HOXA4Q00056 320 aaPredicted RBP13.12□□□□□ -0.31
CCDC78-216ENST00000544996 FAM76BQ5HYJ3 339 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 ZNF684Q5T5D7 378 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 TEX36Q5VZQ5 186 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 CD276Q5ZPR3 534 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 DOK3Q7L591 496 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 KCTD20Q7Z5Y7 419 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 SCCPDHQ8NBX0 429 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 OR5A2Q8NGI9 324 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 HPSE2Q8WWQ2 592 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 RAB40AQ8WXH6 277 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 MYCBPQ99417 103 aaPredicted RBP13.12□□□□□ -0.31
CCDC78-216ENST00000544996 ADI1Q9BV57 179 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 FAM118AQ9NWS6 357 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 OPN4Q9UHM6 478 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 GNG8Q9UK08 70 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 SVEP1Q4LDE5 3571 aa13.12□□□□□ -0.31
CCDC78-216ENST00000544996 OR5B21A6NL26 309 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 DHRS7CA6NNS2 312 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 ZNF732B4DXR9 585 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 P2RY10O00398 339 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 NRASP01111 189 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 GYPAP02724 150 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 EGR1P18146 543 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 EPHA1P21709 976 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 CEP78Q5JTW2 689 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 PLCXD3Q63HM9 321 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 WDR25Q64LD2 544 aaPredicted RBP13.11□□□□□ -0.31
CCDC78-216ENST00000544996 MOB3CQ70IA8 216 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 CATSPERDQ86XM0 798 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 FAM90A1Q86YD7 464 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 ENTHD1Q8IYW4 607 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 ZNF555Q8NEP9 628 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 OR10Z1Q8NGY1 313 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 RHOXF1Q8NHV9 184 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 ZNF418Q8TF45 676 aaPredicted RBP13.11□□□□□ -0.31
CCDC78-216ENST00000544996 RORBQ92753 470 aa13.11□□□□□ -0.31
CCDC78-216ENST00000544996 RPL3LQ92901 407 aaKnown RBP13.11□□□□□ -0.31
CCDC78-216ENST00000544996 C12orf43Q96C57 262 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms