RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 PRRG4Q9BZD6 226 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 MCTS1Q9ULC4 181 aaKnown RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 MED19A0JLT2 244 aaPredicted RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 LILRA1O75019 489 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 OR2A4O95047 310 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 H3F3AP84243 136 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 SULF2Q8IWU5 870 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 CPEB3Q8NE35 698 aaKnown RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 OR2A7Q96R45 310 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 MRI1Q9BV20 369 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 TMEM231Q9H6L2 316 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 TAS2R8Q9NYW2 309 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 MBD2Q9UBB5 411 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 GPR160Q9UJ42 338 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 RNF222A6NCQ9 220 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 ZNF716A6NP11 495 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 F8VVB4 439 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 F8VWA3 439 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 RAB14P61106 215 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 TMEM65Q6PI78 240 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 SLC16A14Q7RTX9 510 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 CALHM1Q8IU99 346 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 PRR18Q8N4B5 295 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 GJC3Q8NFK1 279 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 TRAV39A0A0B4J263 110 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 OR14I1A6ND48 311 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 EFSO43281 561 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 BPNT1O95861 308 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 PDGFAP04085 211 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 CASRP41180 1078 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 OR3A2P47893 321 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 ZNF92Q03936 586 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 HIKESHIQ53FT3 197 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 ESCO2Q56NI9 601 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 SIGIRRQ6IA17 410 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 PGAP1Q75T13 922 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 LYG2Q86SG7 212 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 GCNT2Q8N0V5 402 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 SUN5Q8TC36 379 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 OIT3Q8WWZ8 545 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 BORCS8Q96FH0 119 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 ZNF2Q9BSG1 426 aaPredicted RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 ESRP2Q9H6T0 727 aaKnown RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 PTTG3PQ9NZH4 202 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 OR5AC2Q9NZP5 309 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 PRSS50Q9UI38 385 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 DOCK9Q9BZ29 2069 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 IGLV3-32A0A0A0MS00 114 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 MSGN1A6NI15 193 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 MRPL33O75394 65 aaKnown RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 DHRS3O75911 302 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 CSTBP04080 98 aaKnown RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 SERPINA5P05154 406 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 CD79AP11912 226 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 IL32P24001 234 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 DUSP1P28562 367 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 RAC1P63000 192 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 NUFIP2Q7Z417 695 aaKnown RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 SEMA6DQ8NFY4 1073 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 OR11L1Q8NGX0 322 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 RBPMSQ93062 196 aaKnown RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 FOXRED1Q96CU9 486 aaPredicted RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 MARS2Q96GW9 593 aaKnown RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 C5orf66Q9H5L9 145 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 FOXD3Q9UJU5 478 aaPredicted RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 C5orf49A4QMS7 147 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 TLX3O43711 291 aaPredicted RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 SCRN3Q0VDG4 424 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 OR1C1Q15619 314 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 CHRFAM7AQ494W8 412 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 PABPC1L2AQ5JQF8 200 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 PLCXD3Q63HM9 321 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 KCNG3Q8TAE7 436 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 SLC25A43Q8WUT9 341 aaPredicted RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 LIME1Q9H400 295 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 OR2S2Q9NQN1 319 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 PLEKHJ1Q9NW61 149 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 UPB1Q9UBR1 384 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 TRPM6Q9BX84 2022 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 ZNF850A8MQ14 1090 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 H3BUI4 141 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 CD74P04233 296 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 CD59P13987 128 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 ZBTB25P24278 435 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 RPS27AP62979 156 aaKnown RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 CLEC18BQ6UXF7 455 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 OR5T2Q8NGG2 359 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 OR6S1Q8NH40 331 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 FNDC9Q8TBE3 224 aa3.28□□□□□ -1.88
BRCA2-206ENST00000544455 METTL8Q9H825 291 aaKnown RBP3.28□□□□□ -1.88
BRCA2-206ENST00000544455 TMEM265A0A087WTH1 108 aa3.27□□□□□ -1.89
BRCA2-206ENST00000544455 HSPB2A8KAH6 182 aa3.27□□□□□ -1.89
BRCA2-206ENST00000544455 F12P00748 615 aaPredicted RBP3.27□□□□□ -1.89
BRCA2-206ENST00000544455 EIF1P41567 113 aaKnown RBP3.27□□□□□ -1.89
BRCA2-206ENST00000544455 ARF1P84077 181 aaKnown RBP3.27□□□□□ -1.89
BRCA2-206ENST00000544455 HSPB2Q16082 182 aa3.27□□□□□ -1.89
BRCA2-206ENST00000544455 NHLRC3Q5JS37 347 aa3.27□□□□□ -1.89
BRCA2-206ENST00000544455 CCDC28AQ8IWP9 274 aa3.27□□□□□ -1.89
BRCA2-206ENST00000544455 OR2M7Q8NG81 312 aa3.27□□□□□ -1.89
BRCA2-206ENST00000544455 DCUN1D4Q92564 292 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms