RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PSMD9O00233 223 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 DVL1O14640 695 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ENSAO43768 121 aaKnown RBP10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 SFTPBP07988 381 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 MUC1P15941 1255 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 POLR2IP36954 125 aaKnown RBP10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 TGM4P49221 684 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 RASSF2P50749 326 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ACTG1P63261 375 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 PRDX4Q13162 271 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 CD276Q5ZPR3 534 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 KCTD18Q6PI47 426 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 C12orf54Q6X4T0 127 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 MEPCEQ7L2J0 689 aaKnown RBP10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 KRT77Q7Z794 578 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 AMIGO2Q86SJ2 522 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ZNF679Q8IYX0 411 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 TCEANCQ8N8B7 351 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 TMEM163Q8TC26 289 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 GCDHQ92947 438 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 TECTBQ96PL2 329 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 PKP2Q99959 881 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 MICU1Q9BPX6 476 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ADGRL4Q9HBW9 690 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 KRT84Q9NSB2 600 aa10.85□□□□□ -0.67
TNFRSF1A-215ENST00000543359 TRAV40A0A0B4J280 105 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 TMEM269A0A1B0GVZ9 245 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 TMEM210A6NLX4 147 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 MAGEB4O15481 346 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ZNF254O75437 659 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 LIPFP07098 398 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 HKR1P10072 659 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 GNALP38405 381 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 IL5RAQ01344 420 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 MFGE8Q08431 387 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 BAMBIQ13145 260 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 SLC9A3R2Q15599 337 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 SNCBQ16143 134 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 C11orf91Q3C1V1 193 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 WDR38Q5JTN6 314 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ATPAF1Q5TC12 328 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 C1orf146Q5VVC0 180 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 NXNL2Q5VZ03 156 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 STUMQ69YW2 141 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 BTN2A1Q7KYR7 527 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ASRGL1Q7L266 308 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ZDHHC13Q8IUH4 622 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 SCCPDHQ8NBX0 429 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 LY6G5BQ8NDX9 201 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 OR10Z1Q8NGY1 313 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 ASB17Q8WXJ9 295 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 PIGCQ92535 297 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 RPL3LQ92901 407 aaKnown RBP10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 C12orf43Q96C57 262 aaKnown RBP10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 DUX5Q96PT3 197 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 RAB3IPQ96QF0 476 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 CNN2Q99439 309 aaKnown RBP10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 CCL13Q99616 98 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 CIB1Q99828 191 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 MROQ9BYG7 248 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 MS4A7Q9GZW8 240 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 PBOV1Q9GZY1 135 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 SIRPDQ9H106 197 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 WDR13Q9H1Z4 485 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 HAO2Q9NYQ3 351 aa10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 NUFIP1Q9UHK0 495 aaKnown RBP10.84□□□□□ -0.67
TNFRSF1A-215ENST00000543359 CENPVL3A0A0U1RRI6 287 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 MDFIC2A0A1B0GVS7 189 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 ANXA2P2A6NMY6 339 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 TMPRSS2O15393 492 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 RNASE1P07998 156 aaKnown RBP10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 MICBQ29980 383 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 AWAT1Q58HT5 328 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 LCN1P1Q5VSP4 162 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 ZNF322Q6U7Q0 402 aaPredicted RBP10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 RBMS3Q6XE24 437 aaKnown RBP10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 BRD3OSQ6XYD6 125 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 ZDHHC23Q8IYP9 409 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 FTMTQ8N4E7 242 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 OR51E1Q8TCB6 317 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 ITFG2Q969R8 447 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 CENPNQ96H22 339 aaPredicted RBP10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 RNF170Q96K19 258 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 IL4I1Q96RQ9 567 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 APOL4Q9BPW4 351 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 RTL8AQ9BWD3 113 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 OR51I2Q9H344 312 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 ABCB9Q9NP78 766 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 GPR84Q9NQS5 396 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 RPUSD1Q9UJJ7 312 aaKnown RBP10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 TMEM14AQ9Y6G1 99 aa10.83□□□□□ -0.68
TNFRSF1A-215ENST00000543359 ZNF816-ZNF321PA0A0X1KG74 233 aa10.82□□□□□ -0.68
TNFRSF1A-215ENST00000543359 A0A1B0GTI1 187 aa10.82□□□□□ -0.68
TNFRSF1A-215ENST00000543359 SLC22A31A6NKX4 558 aa10.82□□□□□ -0.68
TNFRSF1A-215ENST00000543359 E9PQ18 207 aa10.82□□□□□ -0.68
TNFRSF1A-215ENST00000543359 HAX1O00165 279 aa10.82□□□□□ -0.68
TNFRSF1A-215ENST00000543359 P2RY10O00398 339 aa10.82□□□□□ -0.68
TNFRSF1A-215ENST00000543359 RHBDL1O75783 438 aa10.82□□□□□ -0.68
TNFRSF1A-215ENST00000543359 ECDO95905 644 aaPredicted RBP10.82□□□□□ -0.68
TNFRSF1A-215ENST00000543359 TTRP02766 147 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms