RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 RPL34P49207 117 aaKnown RBP3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 RORCP51449 518 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 TSPAN5P62079 268 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 UBE2IP63279 158 aaKnown RBP3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 SLC25A11Q02978 314 aaKnown RBP3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 PAX8Q06710 450 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 DMC1Q14565 340 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 CT45A1Q5HYN5 189 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 UTF1Q5T230 341 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 NANOGP8Q6NSW7 305 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 CNIH2Q6PI25 160 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 CDC20BQ86Y33 519 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 NAXDQ8IW45 347 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 SELENOHQ8IZQ5 122 aaKnown RBP3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 BLIDQ8IZY5 108 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 KIR2DL5AQ8N109 375 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 C4orf33Q8N1A6 199 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 KIR2DL5BQ8NHK3 375 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 CT45A3Q8NHU0 189 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 ITFG1Q8TB96 612 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 KCTD4Q8WVF5 259 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 PYDC1Q8WXC3 89 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 ACOT11Q8WXI4 607 aaPredicted RBP3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 BAALCQ8WXS3 180 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 TMEM54Q969K7 222 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 EEF1AKMT3Q96AZ1 226 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 RAD51AP1Q96B01 352 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 PDXPQ96GD0 296 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 CPB2Q96IY4 423 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 B3GALT6Q96L58 329 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 COA1Q9GZY4 146 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 TRABDQ9H4I3 376 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 Q9H521 79 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 TRIM45Q9H8W5 580 aaPredicted RBP3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 CTPS2Q9NRF8 586 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 SLC17A7Q9P2U7 560 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 ENPP5Q9UJA9 477 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 GINS2Q9Y248 185 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF256Q9Y2P7 627 aaPredicted RBP3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 RNF11Q9Y3C5 154 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 UGT2A1Q9Y4X1 527 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 FLVCR1Q9Y5Y0 555 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 V9GYY9 64 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 XIRP2A4UGR9 3374 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 KMT2BQ9UMN6 2715 aaPredicted RBP3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 SETXQ7Z333 2677 aaKnown RBP3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 CACNA1HO95180 2353 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 SCN5AQ14524 2016 aa3.02□□□□□ -1.93
SFSWAP-211ENST00000542813 SCN9AQ15858 1988 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 BAZ2BQ9UIF8 2168 aaKnown RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 FLNBO75369 2602 aaKnown RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 IGHV3-35A0A0C4DH35 117 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 A0A1B0GW15 77 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 PSMB11A5LHX3 300 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 C12orf77C9JDV5 145 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 SMKR1H3BMG3 65 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 H3BN98 237 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 TXNDC9O14530 226 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 AGPAT2O15120 278 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 CALUO43852 315 aaPredicted RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 ICOSLGO75144 302 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 CRTAPO75718 401 aaPredicted RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 CBR3O75828 277 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 TDP2O95551 362 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 SNAP29O95721 258 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 RPN2P04844 631 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 ARG1P05089 322 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 TACSTD2P09758 323 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 THRAP10827 490 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 UCHL3P15374 230 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 BGNP21810 368 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 F8A1P23610 371 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 VDAC2P45880 294 aaPredicted RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 CSNK1A1P48729 337 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 NKX2-5P52952 324 aaPredicted RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 SLC18A1P54219 525 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 RPL10AP62906 217 aaKnown RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 CXCL6P80162 114 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF763Q0D2J5 394 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 ORC2Q13416 577 aaPredicted RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 NAB1Q13506 487 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 CDK10Q15131 360 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 TRIP13Q15645 432 aaPredicted RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF726P1Q15940 193 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 PRR4Q16378 134 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 SGCAQ16586 387 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 C5orf64Q2M2E5 130 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 PAN3Q58A45 887 aaKnown RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 BRMS1LQ5PSV4 323 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 C1orf100Q5SVJ3 147 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 OGFRL1Q5TC84 451 aaPredicted RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 C1orf146Q5VVC0 180 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 TMIGD1Q6UXZ0 262 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 TMEM150AQ86TG1 271 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 SLC25A42Q86VD7 318 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 SLC13A5Q86YT5 568 aaPredicted RBP3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 BBS7Q8IWZ6 715 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 VKORC1L1Q8N0U8 176 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 Q8N377 158 aa3.01□□□□□ -1.93
SFSWAP-211ENST00000542813 C17orf78Q8N4C9 275 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms