RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ST3GAL6Q9Y274 331 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 SLC34A2O95436 690 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 POU2F2P09086 479 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 CXCL2P19875 107 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 CSF2RBP32927 897 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 RPS16P62249 146 aaKnown RBP14.31□□□□□ -0.12
VARS2-212ENST00000542001 SHBQ15464 509 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 PLXDC2Q6UX71 529 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 MAFAQ8NHW3 353 aaPredicted RBP14.31□□□□□ -0.12
VARS2-212ENST00000542001 SLC25A43Q8WUT9 341 aaPredicted RBP14.31□□□□□ -0.12
VARS2-212ENST00000542001 RNF141Q8WVD5 230 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 UTP23Q9BRU9 249 aaKnown RBP14.31□□□□□ -0.12
VARS2-212ENST00000542001 MRPL22Q9NWU5 206 aaKnown RBP14.31□□□□□ -0.12
VARS2-212ENST00000542001 SVBPQ8N300 66 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 CCDC71LQ8N9Z2 235 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 ADAD2Q8NCV1 583 aaKnown RBP14.31□□□□□ -0.12
VARS2-212ENST00000542001 TAF9BQ9HBM6 251 aa14.31□□□□□ -0.12
VARS2-212ENST00000542001 OR2M5A3KFT3 312 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 NRASP01111 189 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 CCL3P10147 92 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 S100A2P29034 98 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 GAS1P54826 345 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 CLLU1Q5K131 121 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 HDHD3Q9BSH5 251 aaPredicted RBP14.3□□□□□ -0.12
VARS2-212ENST00000542001 BOKQ9UMX3 212 aaPredicted RBP14.3□□□□□ -0.12
VARS2-212ENST00000542001 ZFHX2Q9C0A1 2572 aaPredicted RBP14.3□□□□□ -0.12
VARS2-212ENST00000542001 FNDC1Q4ZHG4 1894 aaPredicted RBP14.3□□□□□ -0.12
VARS2-212ENST00000542001 A0A0U1RQK1 487 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 C7orf66A4D0T2 115 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 PIGPP57054 158 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 ECH1Q13011 328 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 SHEQ5VZ18 495 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 NPAS1Q99742 590 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 EMC3Q9P0I2 261 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 DUSP13Q9UII6 198 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 FLVCR1Q9Y5Y0 555 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 ABCA4P78363 2273 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 A0A0G2JK05 382 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 CER1O95813 267 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 HLA-HP01893 362 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 LTBRP36941 435 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 TAGLNQ01995 201 aaKnown RBP14.3□□□□□ -0.12
VARS2-212ENST00000542001 C3AR1Q16581 482 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 ADAM5Q6NVV9 412 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 ZNF385AQ96PM9 386 aaKnown RBP14.3□□□□□ -0.12
VARS2-212ENST00000542001 SOX7Q9BT81 388 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 FAM86C1Q9NVL1 165 aa14.3□□□□□ -0.12
VARS2-212ENST00000542001 HTTP42858 3142 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 IFNA2P01563 188 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 IDH3GP51553 393 aaPredicted RBP14.29□□□□□ -0.12
VARS2-212ENST00000542001 RHBDD2Q6NTF9 364 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 MRGPREQ86SM8 312 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 BPHLQ86WA6 291 aaPredicted RBP14.29□□□□□ -0.12
VARS2-212ENST00000542001 BAP18Q8IXM2 172 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 SLC38A9Q8NBW4 561 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 TRAPPC2LQ9UL33 140 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 OR6C76A6NM76 312 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 IL5P05113 134 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 RPS4Y1P22090 263 aaKnown RBP14.29□□□□□ -0.12
VARS2-212ENST00000542001 HAAOP46952 286 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 CCL11P51671 97 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 RAB32Q13637 225 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 AADACL3Q5VUY0 350 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 C11orf87Q6NUJ2 197 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 ST7LQ8TDW4 575 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 PCDHB10Q9UN67 800 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 LRP3O75074 770 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 WDR1O75083 606 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 VSIG8P0DPA2 414 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 ZNF32P17041 273 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 DMWDQ09019 674 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 PEA15Q15121 130 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 TMEM229BQ8NBD8 167 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 TTC9Q92623 222 aa14.29□□□□□ -0.12
VARS2-212ENST00000542001 TRPM7Q96QT4 1865 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 UNC80Q8N2C7 3258 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 MRPS34P82930 218 aaKnown RBP14.28□□□□□ -0.12
VARS2-212ENST00000542001 MRPL49Q13405 166 aaKnown RBP14.28□□□□□ -0.12
VARS2-212ENST00000542001 ADAT1Q9BUB4 502 aaKnown RBP14.28□□□□□ -0.12
VARS2-212ENST00000542001 ARRDC1-AS1Q9H2J1 176 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 ZFP64Q9NPA5 681 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 LIPT2A6NK58 231 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 CST7O76096 145 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 RAB5BP61020 215 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 C19orf57Q0VDD7 668 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 OR2W3Q7Z3T1 314 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 OR1S2Q8NGQ3 325 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 ANGPTL6Q8NI99 470 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 RTN4IP1Q8WWV3 396 aaPredicted RBP14.28□□□□□ -0.12
VARS2-212ENST00000542001 ASB10Q8WXI3 467 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 LUZP4Q9P127 313 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 TMEM200CA6NKL6 621 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 RFPL4AA6NLU0 287 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 RFPL4AL1F8VTS6 287 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 RAMP1O60894 148 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 TUSC2O75896 110 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 MPC2O95563 127 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 F12P00748 615 aaPredicted RBP14.28□□□□□ -0.12
VARS2-212ENST00000542001 PTGFRP43088 359 aa14.28□□□□□ -0.12
VARS2-212ENST00000542001 CEBPEQ15744 281 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms