RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 COL6A6A6NMZ7 2263 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 VWA8A3KMH1 1905 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 ADAMTS9Q9P2N4 1935 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 MYH10P35580 1976 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 MYO18AQ92614 2054 aaKnown RBP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 KIR2DL5BA0A0G2JN68 375 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 KIR2DL5BA0A0G2JPC4 375 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 GOLGA8QA0A0J9YX86 632 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 KLF18A0A0U1RQI7 1052 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 C1orf232A0A0U1RR37 186 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 CIB4A0PJX0 185 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 GOLGA8JA6NMD2 632 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 A8MUA0 341 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 SRRM5B3KS81 715 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 PSMD11O00231 422 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 SCAMP2O15127 329 aaKnown RBP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 SIVA1O15304 175 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 NIPSNAP2O75323 286 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 SCELO95171 688 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 LCA5LO95447 670 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 F2RP25116 425 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 GABRR2P28476 465 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 RAB7AP51149 207 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 CCR8P51685 355 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 HADHBP55084 474 aaKnown RBP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 YWHAEP62258 255 aaKnown RBP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 POLR2GP62487 172 aaKnown RBP eCLIP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 LCN2P80188 198 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 SMARCB1Q12824 385 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 KIAA0087Q14695 138 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 FAM83EQ2M2I3 478 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 TRMT5Q32P41 509 aaKnown RBP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 RFX4Q33E94 735 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 TPTE2P1Q5T6R2 138 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 ADNP2Q6IQ32 1131 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 MRPL21Q7Z2W9 205 aaKnown RBP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 STX12Q86Y82 276 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 CD302Q8IX05 232 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 ST13P4Q8IZP2 240 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 TMEM61Q8N0U2 210 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 KIR2DL5AQ8N109 375 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 TCAIMQ8N3R3 496 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 ZADH2Q8N4Q0 377 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 MREGQ8N565 214 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 TRAM1L1Q8N609 369 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF565Q8N9K5 539 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 DNAAF3Q8N9W5 541 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 LRRC75AQ8NAA5 344 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 FBXO36Q8NEA4 188 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 OR13C9Q8NGT0 318 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 OR2A1Q8NGT9 310 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 OR10R2Q8NGX6 335 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 KIR2DL5BQ8NHK3 375 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF461Q8TAF7 563 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 NUBPLQ8TB37 319 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF596Q8TC21 504 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 ISOC2Q96AB3 205 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 FAM131CQ96AQ9 280 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 TMA16Q96EY4 203 aaKnown RBP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 RASL11BQ9BPW5 248 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 TM6SF2Q9BZW4 377 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 YIPF3Q9GZM5 350 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 TPK1Q9H3S4 243 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 ABCB10Q9NRK6 738 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 VNN3Q9NY84 501 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF282Q9UDV7 671 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 NUFIP1Q9UHK0 495 aaKnown RBP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF107Q9UII5 783 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 MOKQ9UQ07 419 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 YARS2Q9Y2Z4 477 aaKnown RBP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 CBY1Q9Y3M2 126 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 FAM32AQ9Y421 112 aaKnown RBP3.09□□□□□ -1.91
SNHG1-217ENST00000541578 KPTNQ9Y664 436 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 USP9XQ93008 2570 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-217ENST00000541578 LAMA5O15230 3695 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 TSC2P49815 1807 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 IGF2RP11717 2491 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 TSPAN11A1L157 253 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 MYBPHLA2RUH7 354 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 GOLGA8IPA6NC78 632 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 ARL5CA6NH57 179 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 SYCE1LA8MT33 242 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 GOLGA8KD6RF30 607 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 SLC9A3R1O14745 358 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-217ENST00000541578 POLR1CO15160 346 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-217ENST00000541578 SLC31A2O15432 143 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 CCL16O15467 120 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 DPM1O60762 260 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 ICOSLGO75144 302 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 SUPT3HO75486 399 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 CRTAPO75718 401 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-217ENST00000541578 HMGN1P05114 100 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 NR2C1P13056 603 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 CCNOP22674 350 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 ZBTB25P24278 435 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 CRABP2P29373 138 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 OR1E1P30953 314 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 RBMXP38159 391 aaKnown RBP3.08□□□□□ -1.92
SNHG1-217ENST00000541578 RFC3P40938 356 aa3.08□□□□□ -1.92
SNHG1-217ENST00000541578 AQP2P41181 271 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms