RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 RRNAD1Q96FB5 475 aaKnown RBP15.1■□□□□ 0.01
SPIDR-227ENST00000541342 ADAT1Q9BUB4 502 aaKnown RBP15.1■□□□□ 0.01
SPIDR-227ENST00000541342 SLC6A15Q9H2J7 730 aa15.1■□□□□ 0.01
SPIDR-227ENST00000541342 EEF1E1-BLOC1S5C9J1V9 151 aa15.1■□□□□ 0.01
SPIDR-227ENST00000541342 EIF1AYO14602 144 aaKnown RBP15.1■□□□□ 0.01
SPIDR-227ENST00000541342 ACTL6AO96019 429 aa15.1■□□□□ 0.01
SPIDR-227ENST00000541342 F10P00742 488 aa15.1■□□□□ 0.01
SPIDR-227ENST00000541342 AKR1C4P17516 323 aa15.1■□□□□ 0.01
SPIDR-227ENST00000541342 RAB12Q6IQ22 244 aa15.1■□□□□ 0.01
SPIDR-227ENST00000541342 ZNF704Q6ZNC4 412 aaPredicted RBP15.1■□□□□ 0.01
SPIDR-227ENST00000541342 KCTD9Q7L273 389 aa15.1■□□□□ 0.01
SPIDR-227ENST00000541342 LINC00518Q8N0U6 118 aa15.1■□□□□ 0.01
SPIDR-227ENST00000541342 PIK3IP1Q96FE7 263 aa15.1■□□□□ 0.01
SPIDR-227ENST00000541342 THOC3Q96J01 351 aaKnown RBP15.1■□□□□ 0.01
SPIDR-227ENST00000541342 ASF1BQ9NVP2 202 aa15.1■□□□□ 0.01
SPIDR-227ENST00000541342 KIAA1549Q9HCM3 1950 aa15.1■□□□□ 0.01
SPIDR-227ENST00000541342 TMEM218A2RU14 115 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 CBR3O75828 277 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 CRHP06850 196 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 PGAM2P15259 253 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 ANOS1P23352 680 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 VAMP1P23763 118 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 ZNF239Q16600 458 aaKnown RBP15.09■□□□□ 0.01
SPIDR-227ENST00000541342 CHST4Q8NCG5 386 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 ADAMTS17Q8TE56 1095 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 RNF133Q8WVZ7 376 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 NICN1Q9BSH3 213 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 IL17BQ9UHF5 180 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 METTL21EPA6NDL7 271 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 AQP7P3A6NL99 342 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 F8VVB4 439 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 F8VWA3 439 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 DUS4LO95620 317 aaKnown RBP15.09■□□□□ 0.01
SPIDR-227ENST00000541342 FKBP2P26885 142 aaKnown RBP15.09■□□□□ 0.01
SPIDR-227ENST00000541342 MMP16P51512 607 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 OR10S1Q8NGN2 331 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 RNF126Q9BV68 326 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 DEPPQ9NTK1 212 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 ZFHX4Q86UP3 3567 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 A0A0A6YYD4 124 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 P04436 131 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 PRKACAP17612 351 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 TMEM244Q5VVB8 128 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 FAHD2BQ6P2I3 314 aaPredicted RBP15.09■□□□□ 0.01
SPIDR-227ENST00000541342 TMEM88Q6PEY1 159 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 UQCC3Q6UW78 93 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 LDLRAD3Q86YD5 345 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 BHLHE23Q8NDY6 225 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 STOML3Q8TAV4 291 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 THAP6Q8TBB0 222 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 ROBO4Q8WZ75 1007 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 FAHD2AQ96GK7 314 aa15.09■□□□□ 0.01
SPIDR-227ENST00000541342 PMP2P02689 132 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 PGA4P0DJD7 388 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 PGA3P0DJD8 388 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 ZNF823P16415 610 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 HSD11B1P28845 292 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 GPR85P60893 370 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 H3F3AP84243 136 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 ZNF529Q6P280 563 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 FOXRED1Q96CU9 486 aaPredicted RBP15.08■□□□□ 0
SPIDR-227ENST00000541342 CYTL1Q9NRR1 136 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 CENPMQ9NSP4 180 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 KLF2Q9Y5W3 355 aaPredicted RBP15.08■□□□□ 0
SPIDR-227ENST00000541342 CNTRLQ7Z7A1 2325 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 EP300Q09472 2414 aaPredicted RBP15.08■□□□□ 0
SPIDR-227ENST00000541342 RAB19A4D1S5 217 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 H0YIZ8 118 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 RFPL3SP0C7P2 107 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 B3GALT5-AS1P59052 145 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 DNM1P34Q6PK57 102 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 INO80EQ8NBZ0 244 aaPredicted RBP15.08■□□□□ 0
SPIDR-227ENST00000541342 MARCH1Q8TCQ1 289 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 OXGR1Q96P68 337 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 SELENOIQ9C0D9 397 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 PRELID3BQ9Y3B1 194 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 CSAG2Q9Y5P2 127 aa15.08■□□□□ 0
SPIDR-227ENST00000541342 TRBV6-7A0A0A0MS04 114 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 LRRC3CA6NJW4 275 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 BPNT1O95861 308 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 SERPINF1P36955 418 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 SLC35A1P78382 337 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 HFEQ30201 348 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 HOGA1Q86XE5 327 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 DEFB124Q8NES8 71 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 OR1M1Q8NGA1 313 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 TMEM100Q9NV29 134 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 LHX6Q9UPM6 363 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 ZNF17P17021 662 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 PSMB6P28072 239 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 DEGS2Q6QHC5 323 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 ZSCAN4Q8NAM6 433 aaPredicted RBP15.07■□□□□ 0
SPIDR-227ENST00000541342 CHMP1AQ9HD42 196 aaPredicted RBP15.07■□□□□ 0
SPIDR-227ENST00000541342 TEX13DA0A0J9YY54 714 aaPredicted RBP15.07■□□□□ 0
SPIDR-227ENST00000541342 PINLYPA6NC86 204 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 H2BFMP0C1H6 154 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 GNALP38405 381 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 CYB561P49447 251 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 NOXO1Q8NFA2 376 aa15.07■□□□□ 0
SPIDR-227ENST00000541342 SPACA5Q96QH8 159 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms