RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 MKRN2OSH3BPM6 223 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 M0QZ92 97 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 SGCEO43556 437 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 CHP2O43745 196 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 ENTPD5O75356 428 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 SULT1C4O75897 302 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 PPBPP02775 128 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 P04436 131 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 IFNA4P05014 189 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 NBEAP1P0C6P0 100 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 HSPD1P10809 573 aaKnown RBP3.46□□□□□ -1.86
YBX3-210ENST00000540975 PNMTP11086 282 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 COX4I1P13073 169 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 CRISP2P16562 243 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 TBXA2RP21731 343 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 ELK4P28324 431 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 GTF2E2P29084 291 aaKnown RBP3.46□□□□□ -1.86
YBX3-210ENST00000540975 MAP3K8P41279 467 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 RGS4P49798 205 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 TMEM33P57088 247 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 MAGOHP61326 146 aaKnown RBP3.46□□□□□ -1.86
YBX3-210ENST00000540975 ESRRGP62508 458 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 CSTF1Q05048 431 aaKnown RBP3.46□□□□□ -1.86
YBX3-210ENST00000540975 STX4Q12846 297 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 GGTLC2Q14390 218 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 MESDQ14696 234 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 IMPG1Q17R60 797 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 TMEM249Q2WGJ8 235 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 C5orf47Q569G3 176 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 XKR7Q5GH72 579 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 C11orf71Q6IPW1 123 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 REEP3Q6NUK4 255 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 UGT2A3Q6UWM9 527 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 FAM92BQ6ZTR7 304 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 S100A7AQ86SG5 101 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 SLC26A11Q86WA9 606 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 PHF13Q86YI8 300 aaPredicted RBP3.46□□□□□ -1.86
YBX3-210ENST00000540975 LRRC75A-AS1Q8N1F1 130 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 C6orf223Q8N319 242 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 GTPBP8Q8N3Z3 284 aaPredicted RBP3.46□□□□□ -1.86
YBX3-210ENST00000540975 LRRC18Q8N456 261 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 TPRX1Q8N7U7 411 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 GATSQ8NAP1 163 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 LINC00301Q8NCQ3 95 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 CATSPER1Q8NEC5 780 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 DUSP18Q8NEJ0 188 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 CCDC54Q8NEL0 328 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 OR5B17Q8NGF7 314 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 OR5T3Q8NGG3 340 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 KIR2DL5BQ8NHK3 375 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 GRPEL2Q8TAA5 225 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 KCNG3Q8TAE7 436 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 CXorf40AQ8TE69 158 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 HGDQ93099 445 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 MAGOHBQ96A72 148 aaKnown RBP3.46□□□□□ -1.86
YBX3-210ENST00000540975 TESCQ96BS2 214 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 CMTM5Q96DZ9 223 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 CPB2Q96IY4 423 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 CAPZA3Q96KX2 299 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 TSSK3Q96PN8 268 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 HIST1H4GQ99525 98 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 EBNA1BP2Q99848 306 aaKnown RBP3.46□□□□□ -1.86
YBX3-210ENST00000540975 ECSITQ9BQ95 431 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 TMEM43Q9BTV4 400 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 ROPN1BQ9BZX4 212 aaPredicted RBP3.46□□□□□ -1.86
YBX3-210ENST00000540975 CALHM2Q9HA72 323 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 LYRM4Q9HD34 91 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 ABCB9Q9NP78 766 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 FBXO8Q9NRD0 319 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 NECAP2Q9NVZ3 263 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 PTTG3PQ9NZH4 202 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 VAPAQ9P0L0 249 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 STOX2Q9P2F5 926 aaPredicted RBP3.46□□□□□ -1.86
YBX3-210ENST00000540975 SEC14L3Q9UDX4 400 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 GUCA1BQ9UMX6 200 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 COPS3Q9UNS2 423 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 ALG6Q9Y672 507 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 MED23Q9ULK4 1368 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 MAP2P11137 1827 aaKnown RBP3.46□□□□□ -1.86
YBX3-210ENST00000540975 TAF1LQ8IZX4 1826 aa3.46□□□□□ -1.86
YBX3-210ENST00000540975 SF3B1O75533 1304 aaKnown RBP eCLIP3.45□□□□□ -1.86
YBX3-210ENST00000540975 DCCP43146 1447 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 COL22A1Q8NFW1 1626 aaPredicted RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 ECM29Q5VYK3 1845 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 IGKV1D-8A0A087WSZ0 117 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 A0A1W2PNV4 684 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 FAM92AA1XBS5 289 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 VSTM2BA6NLU5 285 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 EVPLLA8MZ36 301 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 LOC110117498-PIK3R3F6TDL0 507 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 UPK3AO75631 287 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 TNFSF13O75888 250 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 PSMG1O95456 288 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 MOSP00540 346 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 CDK1P06493 297 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 ERCC1P07992 297 aaPredicted RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 CHTF8P0CG12 524 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 UBCP0CG48 685 aaKnown RBP3.45□□□□□ -1.86
YBX3-210ENST00000540975 PCMT1P22061 227 aa3.45□□□□□ -1.86
YBX3-210ENST00000540975 DCKP27707 260 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms