RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 NUDT16L1Q9BRJ7 211 aaKnown RBP7.26□□□□□ -1.25
CHD4-208ENST00000540960 THAP7Q9BT49 309 aaPredicted RBP7.26□□□□□ -1.25
CHD4-208ENST00000540960 PRDM14Q9GZV8 571 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 PPIL3Q9H2H8 161 aaKnown RBP7.26□□□□□ -1.25
CHD4-208ENST00000540960 SLC6A15Q9H2J7 730 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 LIN7BQ9HAP6 207 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 SCPEP1Q9HB40 452 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 GPR35Q9HC97 309 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 EMC7Q9NPA0 242 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 FBLN5Q9UBX5 448 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 ZNF107Q9UII5 783 aaPredicted RBP7.26□□□□□ -1.25
CHD4-208ENST00000540960 BOLA1Q9Y3E2 137 aa7.26□□□□□ -1.25
CHD4-208ENST00000540960 BIRC6Q9NR09 4857 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 IGHV3-15A0A0B4J1V0 119 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 IGKV1D-43A0A0B4J1Z2 117 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 FAM240BA0A1B0GVZ2 78 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 A0A1W2PPK0 400 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 A0A1W2PQ09 198 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 SHISA3A0PJX4 238 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 GABARAPH6UMI1 98 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 M0R135 149 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 XRCC3O43542 346 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 XRCC2O43543 280 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 ORC5O43913 435 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 RAMP1O60894 148 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 PNPP00491 289 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 TTRP02766 147 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 MAS1P04201 325 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 CRHP06850 196 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 CHRM2P08172 466 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 ACSM4P0C7M7 580 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 VSIG8P0DPA2 414 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 GABRA1P14867 456 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 ARSBP15848 533 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 IGFBP3P17936 291 aaPredicted RBP7.25□□□□□ -1.25
CHD4-208ENST00000540960 TUBG1P23258 451 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 OTX1P32242 354 aaPredicted RBP7.25□□□□□ -1.25
CHD4-208ENST00000540960 CDAP32320 146 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 DDOSTP39656 456 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 RPS27P42677 84 aaKnown RBP7.25□□□□□ -1.25
CHD4-208ENST00000540960 MAP2K3P46734 347 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 SLC6A9P48067 706 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 BCAP31P51572 246 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 RAB25P57735 213 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 OR10A3P58181 314 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 ZNF121P58317 390 aaPredicted RBP7.25□□□□□ -1.25
CHD4-208ENST00000540960 SRYQ05066 204 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 MFGE8Q08431 387 aaPredicted RBP7.25□□□□□ -1.25
CHD4-208ENST00000540960 MALLQ13021 153 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 ENDOGQ14249 297 aaKnown RBP7.25□□□□□ -1.25
CHD4-208ENST00000540960 GPR176Q14439 515 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 ZNF79Q15937 498 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 FBXL19-AS1Q494R0 122 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 TMEM69Q5SWH9 247 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 ZNF57Q68EA5 555 aaPredicted RBP7.25□□□□□ -1.25
CHD4-208ENST00000540960 ANKRD16Q6P6B7 361 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 CORO6Q6QEF8 472 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 CFAP77Q6ZQR2 320 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 Q6ZSR3 168 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 SEM1Q6ZVN7 128 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 OR2W3Q7Z3T1 314 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 C1orf174Q8IYL3 243 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 C3orf56Q8N813 242 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 PLPP7Q8NBV4 271 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 OR1M1Q8NGA1 313 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 OR4M1Q8NGD0 313 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 OR5L1Q8NGL2 311 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 OR1J2Q8NGS2 313 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 OR13C5Q8NGS8 318 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 LGALS14Q8TCE9 139 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 WNT2BQ93097 391 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 NABP1Q96AH0 204 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 FAM3DQ96BQ1 224 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 ZNF799Q96GE5 643 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 WDYHV1Q96HA8 205 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 ZFP3Q96NJ6 502 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 FOXN4Q96NZ1 517 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 ESRP2Q9H6T0 727 aaKnown RBP7.25□□□□□ -1.25
CHD4-208ENST00000540960 METTL17Q9H7H0 456 aaPredicted RBP7.25□□□□□ -1.25
CHD4-208ENST00000540960 RNF121Q9H920 327 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 CALHM2Q9HA72 323 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 TUBG2Q9NRH3 451 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 RBFOX1Q9NWB1 397 aaKnown RBP7.25□□□□□ -1.25
CHD4-208ENST00000540960 RHBDL2Q9NX52 303 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 ING1Q9UK53 422 aaPredicted RBP7.25□□□□□ -1.25
CHD4-208ENST00000540960 RAB22AQ9UL26 194 aa7.25□□□□□ -1.25
CHD4-208ENST00000540960 F5H5K5 113 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 P2RY10O00398 339 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 RER1O15258 196 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 DOK2O60496 412 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 DHRS3O75911 302 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 GOSR1O95249 250 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 CSF3P09919 207 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 TRAPPC2P0DI81 140 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 TRAPPC2BP0DI82 140 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 SNRPBP14678 240 aaKnown RBP7.24□□□□□ -1.25
CHD4-208ENST00000540960 SRD5A1P18405 259 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 MPGP29372 298 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 PRKXP51817 358 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 RAG2P55895 527 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms