RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 KRT74Q7RTS7 529 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 OR10Z1Q8NGY1 313 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 WDFY2Q96P53 400 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 TBX15Q96SF7 602 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 PKP2Q99959 881 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 MROQ9BYG7 248 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 FAM206AQ9NX38 181 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 TMEM14AQ9Y6G1 99 aa17.36■□□□□ 0.37
CHFR-217ENST00000540537 A0A0U1RQV5 110 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 PRKYO43930 277 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 SFTPBP07988 381 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 MRPL3P09001 348 aaKnown RBP17.35■□□□□ 0.37
CHFR-217ENST00000540537 DCTDP32321 178 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 RASSF2P50749 326 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 ROM1Q03395 351 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 DEFB112Q30KQ8 113 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 FAM76BQ5HYJ3 339 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 WDR38Q5JTN6 314 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 SLC36A1Q7Z2H8 476 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 ZDHHC23Q8IYP9 409 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 FAM81AQ8TBF8 368 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 HPSE2Q8WWQ2 592 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 ASB17Q8WXJ9 295 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 ST8SIA4Q92187 359 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 PIGCQ92535 297 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 CCL13Q99616 98 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 SIRPDQ9H106 197 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 KRT84Q9NSB2 600 aa17.35■□□□□ 0.37
CHFR-217ENST00000540537 ZNF816-ZNF321PA0A0X1KG74 233 aa17.34■□□□□ 0.37
CHFR-217ENST00000540537 MDFIC2A0A1B0GVS7 189 aa17.34■□□□□ 0.37
CHFR-217ENST00000540537 TMEM269A0A1B0GVZ9 245 aa17.34■□□□□ 0.37
CHFR-217ENST00000540537 ZNF254O75437 659 aa17.34■□□□□ 0.37
CHFR-217ENST00000540537 PDCD1Q15116 288 aa17.34■□□□□ 0.37
CHFR-217ENST00000540537 ZNF679Q8IYX0 411 aa17.34■□□□□ 0.37
CHFR-217ENST00000540537 SGMS2Q8NHU3 365 aa17.34■□□□□ 0.37
CHFR-217ENST00000540537 RNF170Q96K19 258 aa17.34■□□□□ 0.37
CHFR-217ENST00000540537 OR8B4Q96RC9 309 aa17.34■□□□□ 0.37
CHFR-217ENST00000540537 CNN2Q99439 309 aaKnown RBP17.34■□□□□ 0.37
CHFR-217ENST00000540537 ZNF747Q9BV97 191 aa17.34■□□□□ 0.37
CHFR-217ENST00000540537 FGF23Q9GZV9 251 aaPredicted RBP17.34■□□□□ 0.37
CHFR-217ENST00000540537 DNTTIP1Q9H147 329 aa17.34■□□□□ 0.37
CHFR-217ENST00000540537 NOX4Q9NPH5 578 aa17.34■□□□□ 0.37
CHFR-217ENST00000540537 RPUSD1Q9UJJ7 312 aaKnown RBP17.34■□□□□ 0.37
CHFR-217ENST00000540537 PRR32B1ATL7 298 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 ATP5HO75947 161 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 ATP6V1B1P15313 513 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 FASP25445 335 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 MAP2K3P46734 347 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 ZNF829Q3KNS6 432 aaPredicted RBP17.33■□□□□ 0.36
CHFR-217ENST00000540537 ATPAF1Q5TC12 328 aaPredicted RBP17.33■□□□□ 0.36
CHFR-217ENST00000540537 SLX4IPQ5VYV7 408 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 RUSC1-AS1Q66K80 236 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 STUMQ69YW2 141 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 KCTD8Q6ZWB6 473 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 SCCPDHQ8NBX0 429 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 GATAD2BQ8WXI9 593 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 RPL3LQ92901 407 aaKnown RBP17.33■□□□□ 0.36
CHFR-217ENST00000540537 ZDHHC16Q969W1 377 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 SEH1LQ96EE3 360 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 DMRTB1Q96MA1 342 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 RAB3IPQ96QF0 476 aaPredicted RBP17.33■□□□□ 0.36
CHFR-217ENST00000540537 HIST1H2AAQ96QV6 131 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 GABARAPL1Q9H0R8 117 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 CNTD2Q9H8S5 307 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 HAO2Q9NYQ3 351 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 COPS3Q9UNS2 423 aa17.33■□□□□ 0.36
CHFR-217ENST00000540537 CENPVL3A0A0U1RRI6 287 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 A0A1B0GW55 424 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 ZAR1LA6NP61 321 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 G3V2T6 193 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 PSMD9O00233 223 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 GPR37O15354 613 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 HOXA3O43365 443 aaPredicted RBP17.32■□□□□ 0.36
CHFR-217ENST00000540537 MITFO75030 526 aaPredicted RBP17.32■□□□□ 0.36
CHFR-217ENST00000540537 IGLV3-1P01715 115 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 DUX4L2P0CJ85 424 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 DUX4L3P0CJ86 424 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 DUX4L4P0CJ87 422 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 DUX4L5P0CJ88 424 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 DUX4L6P0CJ89 424 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 DUX4L7P0CJ90 424 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 RIDAP52758 137 aaKnown RBP17.32■□□□□ 0.36
CHFR-217ENST00000540537 ARF6P62330 175 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 ELF3P78545 371 aaPredicted RBP17.32■□□□□ 0.36
CHFR-217ENST00000540537 IL13RA1P78552 427 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 EFNB1P98172 346 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 AADACL4Q5VUY2 407 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 KDM4DQ6B0I6 523 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 C16orf87Q6PH81 154 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 DUX4L9Q6RFH8 374 aaPredicted RBP17.32■□□□□ 0.36
CHFR-217ENST00000540537 MEPCEQ7L2J0 689 aaKnown RBP17.32■□□□□ 0.36
CHFR-217ENST00000540537 ZDHHC13Q8IUH4 622 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 FAM216BQ8N7L0 139 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 LY6G5BQ8NDX9 201 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 DUS3LQ96G46 650 aaKnown RBP17.32■□□□□ 0.36
CHFR-217ENST00000540537 MNTQ99583 582 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 PBOV1Q9GZY1 135 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 H2AFY2Q9P0M6 372 aaPredicted RBP17.32■□□□□ 0.36
CHFR-217ENST00000540537 DNAJB11Q9UBS4 358 aa17.32■□□□□ 0.36
CHFR-217ENST00000540537 DUX4Q9UBX2 424 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms