RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 hCG_1807616A0A1W2PRN6 198 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 CDIPTO14735 213 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 HOXA3O43365 443 aaPredicted RBP10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 E2F6O75461 281 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 CSNK2BP67870 215 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 ROM1Q03395 351 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 PRDX4Q13162 271 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 FLOT2Q14254 428 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 CDONQ4KMG0 1287 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 WDR38Q5JTN6 314 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 METTL11BQ5VVY1 283 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 TMEM236Q5W0B7 351 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 METAP1DQ6UB28 335 aaPredicted RBP10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 SLC36A1Q7Z2H8 476 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 SPATA24Q86W54 205 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 BBS1Q8NFJ9 593 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 OR8B12Q8NGG6 310 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 C8orf46Q8TAG6 207 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 PCGF1Q9BSM1 259 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 FGF23Q9GZV9 251 aaPredicted RBP10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 UNKLQ9H9P5 680 aaKnown RBP10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 ACOXLQ9NUZ1 547 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 LRP12Q9Y561 859 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 POMT1Q9Y6A1 747 aa10.82□□□□□ -0.68
SEMA4D-223ENST00000540475 IGHV3OR15-7A0A075B7D8 119 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 IGHV1-69DA0A0B4J2H0 117 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 A0A1B0GW55 424 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 CCDC182A6NF36 153 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 ANXA2P2A6NMY6 339 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 GSC2O15499 205 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 ZNF254O75437 659 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 DNAJC8O75937 253 aaPredicted RBP10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 IGHV1-69P01742 117 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 MELTFP08582 738 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 DUX4L2P0CJ85 424 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 DUX4L3P0CJ86 424 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 DUX4L4P0CJ87 422 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 DUX4L5P0CJ88 424 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 DUX4L6P0CJ89 424 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 DUX4L7P0CJ90 424 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 ATP6V1B1P15313 513 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 GNALP38405 381 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 DAPP51397 102 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 CRISP1P54107 249 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 RPL15P61313 204 aaKnown RBP10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 POU4F2Q12837 409 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 KCTD18Q6PI47 426 aaPredicted RBP10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 DUX4L9Q6RFH8 374 aaPredicted RBP10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 ZNF788Q6ZQV5 615 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 SCCPDHQ8NBX0 429 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 BCAS4Q8TDM0 211 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 HPSE2Q8WWQ2 592 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 GATAD2BQ8WXI9 593 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 TMIGD2Q96BF3 282 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 RAB3IPQ96QF0 476 aaPredicted RBP10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 CCL13Q99616 98 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 RTL8AQ9BWD3 113 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 PAPOLGQ9BWT3 736 aaKnown RBP10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 TEX12Q9BXU0 123 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 BRD7Q9NPI1 651 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 FAM206AQ9NX38 181 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 HAO2Q9NYQ3 351 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 KIF17Q9P2E2 1029 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 DUX4Q9UBX2 424 aa10.81□□□□□ -0.68
SEMA4D-223ENST00000540475 A0A1B0GUS0 222 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 ZNF850A8MQ14 1090 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 NDUFA7O95182 113 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 HCCSP53701 268 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 ARF6P62330 175 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 ESRRGP62508 458 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 ELF3P78545 371 aaPredicted RBP10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 APOFQ13790 326 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 PTGES3Q15185 160 aaKnown RBP10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 SNAPC1Q16533 368 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 ZBTB37Q5TC79 503 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 RUSC1-AS1Q66K80 236 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 C1orf122Q6ZSJ8 110 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 Q6ZSR3 168 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 LDLRAD3Q86YD5 345 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 ZNF679Q8IYX0 411 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 FGFRL1Q8N441 504 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 KIR3DL3Q8N743 410 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 ANGPTL6Q8NI99 470 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 NPRL2Q8WTW4 380 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 ZDHHC16Q969W1 377 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 SEH1LQ96EE3 360 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 PKP2Q99959 881 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 DCTN5Q9BTE1 182 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 CADM1Q9BY67 442 aaKnown RBP10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 OR51I2Q9H344 312 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 PAPOLBQ9NRJ5 636 aaKnown RBP10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 LAMP5Q9UJQ1 280 aa10.8□□□□□ -0.68
SEMA4D-223ENST00000540475 VWFP04275 2813 aa10.79□□□□□ -0.68
SEMA4D-223ENST00000540475 ZNF816-ZNF321PA0A0X1KG74 233 aa10.79□□□□□ -0.68
SEMA4D-223ENST00000540475 A0A1B0GVI7 797 aa10.79□□□□□ -0.68
SEMA4D-223ENST00000540475 TMEM269A0A1B0GVZ9 245 aa10.79□□□□□ -0.68
SEMA4D-223ENST00000540475 FAM181BA6NEQ2 426 aa10.79□□□□□ -0.68
SEMA4D-223ENST00000540475 PRR32B1ATL7 298 aa10.79□□□□□ -0.68
SEMA4D-223ENST00000540475 SRSF10O75494 262 aaKnown RBP10.79□□□□□ -0.68
SEMA4D-223ENST00000540475 MDKP21741 143 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms