RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 MSX2P35548 267 aaPredicted RBP11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 OMPP47874 163 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 TGM4P49221 684 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 PRKXP51817 358 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 CD69Q07108 199 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 BLMHQ13867 455 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 DGUOKQ16854 277 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 PLA1AQ53H76 456 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 FKBP9P1Q75LS8 142 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 SDR9C7Q8NEX9 313 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 DUS3LQ96G46 650 aaKnown RBP11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 HSH2DQ96JZ2 352 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 GAFA1Q96PS6 74 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 CADM1Q9BY67 442 aaKnown RBP11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 WDR13Q9H1Z4 485 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 MUC13Q9H3R2 512 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 MRPL22Q9NWU5 206 aaKnown RBP11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 CD300AQ9UGN4 299 aa11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 SF3B6Q9Y3B4 125 aaKnown RBP11.87□□□□□ -0.51
CCDC144NL-202ENST00000539177 ERICH4A6NGS2 130 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 CDIPTO14735 213 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 TBX1O43435 398 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 PEX14O75381 377 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 PSKH1P11801 424 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 NAA10P41227 235 aaPredicted RBP11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 GSK3BP49841 420 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 TRIM25Q14258 630 aaKnown RBP11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 SMARCD3Q6STE5 483 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 DRAM2Q6UX65 266 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 CYP4Z1Q86W10 505 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 FAM185AQ8N0U4 392 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 FANK1Q8TC84 345 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 C12orf43Q96C57 262 aaKnown RBP11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 COPS4Q9BT78 406 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 MEGF9Q9H1U4 602 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 HAO2Q9NYQ3 351 aa11.86□□□□□ -0.51
CCDC144NL-202ENST00000539177 TENM3Q9P273 2699 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 TRBV4-1A0A0J9YWV2 114 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 OR6C68A6NDL8 312 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 TVP23AA6NH52 213 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 CIB2O75838 187 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 H1F0P07305 194 aaKnown RBP11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 ZNF823P16415 610 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 PYCR1P32322 319 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 KRTAP10-11P60412 298 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 SEC23BQ15437 767 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 ARSJQ5FYB0 599 aaPredicted RBP11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 GLYATQ6IB77 296 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 LYPD4Q6UWN0 246 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 ZBTB46Q86UZ6 589 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 C10orf67Q8IYJ2 551 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 ANKRD19PQ9H560 264 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 MAGEL2Q9UJ55 1249 aa11.85□□□□□ -0.51
CCDC144NL-202ENST00000539177 XRCC2O43543 280 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 SERPINA1P01009 418 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 PF4V1P10720 104 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 COX7A1P24310 79 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 NOS3P29474 1203 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 OTX1P32242 354 aaPredicted RBP11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 GABRA2P47869 451 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 TAF13Q15543 124 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 TMEM95Q3KNT9 176 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 ATPAF1Q5TC12 328 aaPredicted RBP11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 ZNF788Q6ZQV5 615 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 LIAT1Q6ZQX7 453 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 CBLL1Q75N03 491 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 SLC16A9Q7RTY1 509 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 DCXRQ7Z4W1 244 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 TMEM219Q86XT9 240 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 MKXQ8IYA7 352 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 RNF148Q8N7C7 305 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 PIFOQ8TCI5 191 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 RPL3LQ92901 407 aaKnown RBP11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 ASB9Q96DX5 294 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 LRGUKQ96M69 825 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 DDOQ99489 341 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 IFT27Q9BW83 186 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 PAPOLGQ9BWT3 736 aaKnown RBP11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 CDCA4Q9BXL8 241 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 OR52D1Q9H346 318 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 OPA3Q9H6K4 179 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 GORASP2Q9H8Y8 452 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 CENPMQ9NSP4 180 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 ENPP4Q9Y6X5 453 aa11.84□□□□□ -0.51
CCDC144NL-202ENST00000539177 CXCR6O00574 342 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 AKR7A2O43488 359 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 TIPRLO75663 272 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 DIRAS1O95057 198 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 HOXD3P31249 432 aaPredicted RBP11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 SLC6A6P31641 620 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 GNALP38405 381 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 RAB13P51153 203 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 FAM3AP98173 230 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 AANATQ16613 207 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 TIGD6Q17RP2 521 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 GFOD2Q3B7J2 385 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 SLC35F1Q5T1Q4 408 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 DHFR2Q86XF0 187 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 ZDHHC21Q8IVQ6 265 aa11.83□□□□□ -0.52
CCDC144NL-202ENST00000539177 DTX3Q8N9I9 347 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms