RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PTGER4P35408 488 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 ARFRP1Q13795 201 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 NFATC4Q14934 902 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 C14orf28Q4W4Y0 310 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 DNLZQ5SXM8 178 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 LFNGQ8NES3 379 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 RHOVQ96L33 236 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 C1orf147Q96MC9 270 aaPredicted RBP16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 WDR92Q96MX6 357 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 SMDT1Q9H4I9 107 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 FAM60AQ9NP50 221 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 EHFQ9NZC4 300 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 C14orf166Q9Y224 244 aaKnown RBP16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 LSM5Q9Y4Y9 91 aaKnown RBP16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 SEC14L6B5MCN3 397 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 MASP2O00187 686 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 FOXK1P85037 733 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 FAM189A2Q15884 450 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 SOHLH1Q5JUK2 328 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 STX12Q86Y82 276 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 CPNE4Q96A23 557 aaPredicted RBP16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 ARHGAP5-AS1Q96IT6 56 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 BCO1Q9HAY6 547 aa16.44■□□□□ 0.22
SFSWAP-207ENST00000538548 F5P12259 2224 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 PLPP3O14495 311 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 BCAT2O15382 392 aaPredicted RBP16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 PRH1P02810 166 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 GJA4P35212 333 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 P2RY1P47900 373 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 DNM1P34Q6PK57 102 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 GALNT14Q96FL9 552 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 RTN4RQ9BZR6 473 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 FOXQ1Q9C009 403 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 PBOV1Q9GZY1 135 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 NXF5Q9H1B4 397 aaKnown RBP16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 TMED3Q9Y3Q3 217 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 PUS1Q9Y606 427 aaKnown RBP eCLIP16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 FAM221BA6H8Z2 402 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 NPIPB7O75200 414 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 IFNA21P01568 189 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 BCKDHBP21953 392 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 ZNF84P51523 738 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 SNU13P55769 128 aaKnown RBP16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 SLC26A5P58743 744 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 PPP1CAP62136 330 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 CSNK2A1P68400 391 aaPredicted RBP16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 TTLL10Q6ZVT0 673 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 LRRC18Q8N456 261 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 ZNF610Q8N9Z0 462 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 CSNK2A3Q8NEV1 391 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 S100PBPQ96BU1 408 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 SPACA5Q96QH8 159 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 ADOQ96SZ5 270 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 ST6GALNAC5Q9BVH7 336 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 OR11A1Q9GZK7 315 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 BANF2Q9H503 90 aa16.43■□□□□ 0.22
SFSWAP-207ENST00000538548 H7C1Q1 480 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 GPM6BQ13491 265 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 ZNF124Q15973 351 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 RNF144BQ7Z419 303 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 OOSP2Q86WS3 158 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 C19orf47Q8N9M1 422 aaKnown RBP16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 OR10D4PQ8NGN7 298 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 SNIP1Q8TAD8 396 aaKnown RBP16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 ADAMTS18Q8TE60 1221 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 ARGFXA6NJG6 315 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 E5RGE8 158 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 H0Y8X5 98 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 NUDT14O95848 222 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 ZNF20P17024 532 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 KLHL24Q6TFL4 600 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 REC114Q7Z4M0 266 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 SUMF2Q8NBJ7 301 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 PATE1Q8WXA2 126 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 PIGQQ9BRB3 760 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 NSG2Q9Y328 171 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 MMP24Q9Y5R2 645 aa16.42■□□□□ 0.22
SFSWAP-207ENST00000538548 WISP1O95388 367 aa16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 GP1BBP13224 206 aa16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 CD81P60033 236 aa16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 FMODQ06828 376 aa16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 FIP1L1Q6UN15 594 aaKnown RBP16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 EPOPA6NHQ4 379 aa16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 SOX1O00570 391 aaPredicted RBP16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 C1QL1O75973 258 aa16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 F10P00742 488 aa16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 CD63P08962 238 aa16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 GGNBP1Q5YKI7 109 aa16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 LCN10Q6JVE6 187 aa16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 TMEM156Q8N614 296 aa16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 FAM131CQ96AQ9 280 aa16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 CYYR1Q96J86 154 aa16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 URM1Q9BTM9 101 aaKnown RBP16.41■□□□□ 0.22
SFSWAP-207ENST00000538548 TMED7-TICAM2A0A0A6YYA0 188 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 A6NIZ1 184 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 C17orf105B2RV13 164 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 SLC31A2O15432 143 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 PGCP20142 388 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 OR3A4PP47883 348 aa16.4■□□□□ 0.22
SFSWAP-207ENST00000538548 HSD17B7P56937 341 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms