RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 FZD5Q13467 585 aa15.07■□□□□ 0
SCARB1-205ENST00000538291 KIAA0141Q14154 515 aaPredicted RBP15.07■□□□□ 0
SCARB1-205ENST00000538291 OR10D3Q8NH80 312 aa15.07■□□□□ 0
SCARB1-205ENST00000538291 CLDN23Q96B33 292 aa15.07■□□□□ 0
SCARB1-205ENST00000538291 C14orf79Q96F83 325 aa15.07■□□□□ 0
SCARB1-205ENST00000538291 MRGPRX3Q96LB0 322 aa15.07■□□□□ 0
SCARB1-205ENST00000538291 CHST6Q9GZX3 395 aa15.07■□□□□ 0
SCARB1-205ENST00000538291 S100A4P26447 101 aaKnown RBP15.06■□□□□ 0
SCARB1-205ENST00000538291 OR10V1Q8NGI7 309 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 RAB1BQ9H0U4 201 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 GOLT1BQ9Y3E0 138 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 NRAPQ86VF7 1730 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 LRRC3CA6NJW4 275 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 AQP8O94778 261 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 PDGFAP04085 211 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 Q56UQ5 140 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 FAM162BQ5T6X4 162 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 ZNF485Q8NCK3 441 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 CCL17Q92583 94 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 CTDSP1Q9GZU7 261 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 SNRPGP15A8MWD9 76 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 TOX3O15405 576 aaPredicted RBP15.06■□□□□ 0
SCARB1-205ENST00000538291 TMIGD3P0DMS9 266 aaPredicted RBP15.06■□□□□ 0
SCARB1-205ENST00000538291 SLC25A4P12235 298 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 IL9P15248 144 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 FGF7P21781 194 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 ZNF707Q96C28 371 aaPredicted RBP15.06■□□□□ 0
SCARB1-205ENST00000538291 OR2C1O95371 312 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 SULT1A3P0DMM9 295 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 SULT1A4P0DMN0 295 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 GABRB1P18505 474 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 COL9A1P20849 921 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 CNN1P51911 297 aaKnown RBP15.06■□□□□ 0
SCARB1-205ENST00000538291 UBE2MP61081 183 aaKnown RBP15.06■□□□□ 0
SCARB1-205ENST00000538291 TNFAIP6P98066 277 aaPredicted RBP15.06■□□□□ 0
SCARB1-205ENST00000538291 ADAM5Q6NVV9 412 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 TMPRSS11FQ6ZWK6 438 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 TAAR3PQ9P1P4 343 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 ZNF629Q9UEG4 869 aaPredicted RBP15.06■□□□□ 0
SCARB1-205ENST00000538291 IGLV3-16A0A075B6K0 115 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 SNCGO76070 127 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 EPXP11678 715 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 CA6P23280 308 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 KLF3P57682 345 aaPredicted RBP15.06■□□□□ 0
SCARB1-205ENST00000538291 PPP1CAP62136 330 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 GPNMBQ14956 572 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 SMOC1Q9H4F8 434 aa15.06■□□□□ 0
SCARB1-205ENST00000538291 GAR1Q9NY12 217 aaKnown RBP15.06■□□□□ 0
SCARB1-205ENST00000538291 GABRA1P14867 456 aa15.05■□□□□ 0
SCARB1-205ENST00000538291 CD80P33681 288 aa15.05■□□□□ 0
SCARB1-205ENST00000538291 PMP22Q01453 160 aa15.05■□□□□ 0
SCARB1-205ENST00000538291 EXOSC2Q13868 293 aaKnown RBP15.05■□□□□ 0
SCARB1-205ENST00000538291 TRAT1Q6PIZ9 186 aa15.05■□□□□ 0
SCARB1-205ENST00000538291 ZNF793Q6ZN11 406 aa15.05■□□□□ 0
SCARB1-205ENST00000538291 NUFIP2Q7Z417 695 aaKnown RBP15.05■□□□□ 0
SCARB1-205ENST00000538291 OR51I2Q9H344 312 aa15.05■□□□□ 0
SCARB1-205ENST00000538291 TBX19O60806 448 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 RPUSD3Q6P087 351 aaKnown RBP15.05■□□□□ -0
SCARB1-205ENST00000538291 TMEM179BQ7Z7N9 219 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 ORAI1Q96D31 301 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 SLC26A1Q9H2B4 701 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 AAMDCQ9H7C9 122 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 BRWD1Q9NSI6 2320 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 A0A1B0GUH1 482 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 RBP4P02753 201 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 S100A8P05109 93 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 LIMS3P0CW19 117 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 LIMS4P0CW20 117 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 FCER1GP30273 86 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 PRSS36Q5K4E3 855 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 PRR27Q6MZM9 219 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 ARRDC1Q8N5I2 433 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 OR2I1PQ8NGU4 316 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 RAB1CQ92928 201 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 CDX2Q99626 313 aaPredicted RBP15.05■□□□□ -0
SCARB1-205ENST00000538291 GABRG3Q99928 467 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 ZNF416Q9BWM5 594 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 GAL3ST2Q9H3Q3 398 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 LHX9Q9NQ69 397 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 MYO7AQ13402 2215 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 COL22A1Q8NFW1 1626 aaPredicted RBP15.05■□□□□ -0
SCARB1-205ENST00000538291 PEX11BO96011 259 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 SBK3P0C264 359 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 GNG10P50151 68 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 PABPC1L2AQ5JQF8 200 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 TIGD3Q6B0B8 471 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 GPR32P1Q8NGA4 272 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 OR52N4Q8NGI2 321 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 LRFN3Q9BTN0 628 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 F5P12259 2224 aa15.05■□□□□ -0
SCARB1-205ENST00000538291 IGFBP7Q16270 282 aa15.04■□□□□ -0
SCARB1-205ENST00000538291 ADGRG7Q96K78 797 aa15.04■□□□□ -0
SCARB1-205ENST00000538291 SMIM7Q9BQ49 75 aa15.04■□□□□ -0
SCARB1-205ENST00000538291 A0A1B0GTL3 188 aa15.04■□□□□ -0
SCARB1-205ENST00000538291 EPPINO95925 133 aa15.04■□□□□ -0
SCARB1-205ENST00000538291 TMEM229BQ8NBD8 167 aa15.04■□□□□ -0
SCARB1-205ENST00000538291 OR13D1Q8NGV5 346 aa15.04■□□□□ -0
SCARB1-205ENST00000538291 OR10Z1Q8NGY1 313 aa15.04■□□□□ -0
SCARB1-205ENST00000538291 OR4Q3Q8NH05 313 aa15.04■□□□□ -0
SCARB1-205ENST00000538291 PLPPR2Q96GM1 343 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms