RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PTDSS2Q9BVG9 487 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 EXOSC3Q9NQT5 275 aaKnown RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 FOXJ2Q9P0K8 574 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 NTMQ9P121 344 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 PRR19A6NJB7 356 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 C16orf97H3BN30 126 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 TCRBP04435 133 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 TIAL1Q01085 375 aaKnown RBP eCLIP4.77□□□□□ -1.65
LRP6-203ENST00000538239 ZNF85Q03923 595 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 ETFDHQ16134 617 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 DRAM2Q6UX65 266 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 SYS1Q8N2H4 156 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 TMEM105Q8N8V8 129 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 GPR32P1Q8NGA4 272 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 CNTNAP3Q9BZ76 1288 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 ISYNA1Q9NPH2 558 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 PCYT1BQ9Y5K3 369 aaPredicted RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 TCRBV16S1A1N1A0A5B0 115 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 SMLR1H3BR10 107 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 FOXS1O43638 330 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 TBX19O60806 448 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 RPS27AP62979 156 aaKnown RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 UBA52P62987 128 aaKnown RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 SCGB2A2Q13296 93 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 HABP2Q14520 560 aaPredicted RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 PEA15Q15121 130 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 CSRP2Q16527 193 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 C1QL3Q5VWW1 255 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 OR13F1Q8NGS4 319 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 OR10R2Q8NGX6 335 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 ZFAND2BQ8WV99 257 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 ASB5Q8WWX0 329 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 OR8B4Q96RC9 309 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 PSD2Q9BQI7 771 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 NDUFB11Q9NX14 153 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 OR6C68A6NDL8 312 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 TGFBR1P36897 503 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 NKX2-1P43699 371 aaPredicted RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 RHOUQ7L0Q8 258 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 NRARPQ7Z6K4 114 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 NAA40Q86UY6 237 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 MOGAT3Q86VF5 341 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 CALHM3Q86XJ0 350 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 NANPQ8TBE9 248 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 VSTM2LQ96N03 204 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 RANGRFQ9HD47 186 aaPredicted RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 LTBP1Q14766 1721 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 SH2D7A6NKC9 451 aaPredicted RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 M0R1X1 148 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 EPPINO95925 133 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 NGFP01138 241 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 CSF2RBP32927 897 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 CEACAM6P40199 344 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 CDKN2AP42771 156 aaKnown RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 DGCR2P98153 550 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 PSG6Q00889 435 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 TLE4Q04727 773 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 Q56UQ5 140 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 LYG1Q8N1E2 194 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 RFESDQ8TAC1 157 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 TMEM171Q8WVE6 324 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 CLDN23Q96B33 292 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 LIN37Q96GY3 246 aaPredicted RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 BRCA1P38398 1863 aaKnown RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 K7EQM0 130 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 GPX5O75715 221 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 EPHA2P29317 976 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 DBPQ10586 325 aaPredicted RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 WDR38Q5JTN6 314 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 SYT6Q5T7P8 510 aaPredicted RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 TMEM268Q5VZI3 342 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 FAHD1Q6P587 224 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 GLCCI1Q86VQ1 547 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 MOB3AQ96BX8 217 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 SEH1LQ96EE3 360 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 ZNF416Q9BWM5 594 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 NMES1Q9C002 83 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 C11orf54Q9H0W9 315 aaPredicted RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 SAP30LQ9HAJ7 183 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 DLL4Q9NR61 685 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 PLEKHB1Q9UF11 243 aaPredicted RBP4.77□□□□□ -1.65
LRP6-203ENST00000538239 DTX4Q9Y2E6 619 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 LOC285556D6RIA3 1793 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 SCN3AQ9NY46 2000 aa4.77□□□□□ -1.65
LRP6-203ENST00000538239 ARID1BQ8NFD5 2236 aaPredicted RBP4.76□□□□□ -1.65
LRP6-203ENST00000538239 IGHV3OR15-7A0A075B7D8 119 aa4.76□□□□□ -1.65
LRP6-203ENST00000538239 LIPT2A6NK58 231 aa4.76□□□□□ -1.65
LRP6-203ENST00000538239 ATP6V1G1O75348 118 aa4.76□□□□□ -1.65
LRP6-203ENST00000538239 DTYMKP23919 212 aa4.76□□□□□ -1.65
LRP6-203ENST00000538239 HOXD11P31277 338 aaPredicted RBP4.76□□□□□ -1.65
LRP6-203ENST00000538239 S100A12P80511 92 aa4.76□□□□□ -1.65
LRP6-203ENST00000538239 TMEM65Q6PI78 240 aa4.76□□□□□ -1.65
LRP6-203ENST00000538239 TMPRSS11FQ6ZWK6 438 aa4.76□□□□□ -1.65
LRP6-203ENST00000538239 FAM58AQ8N1B3 248 aa4.76□□□□□ -1.65
LRP6-203ENST00000538239 OR14K1Q8NGZ2 314 aa4.76□□□□□ -1.65
LRP6-203ENST00000538239 ARV1Q9H2C2 271 aa4.76□□□□□ -1.65
LRP6-203ENST00000538239 A0A1W2PQD3 144 aa4.76□□□□□ -1.65
LRP6-203ENST00000538239 ZNHIT1O43257 154 aa4.76□□□□□ -1.65
LRP6-203ENST00000538239 AKR7A2O43488 359 aa4.76□□□□□ -1.65
LRP6-203ENST00000538239 DHRS3O75911 302 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms